Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx41Q91VN6 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx41Q91VN6 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC18.25■□□□□ 0.51
Ddx41Q91VN6 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx41Q91VN6 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Ddx41Q91VN6 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx41Q91VN6 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx41Q91VN6 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Ddx41Q91VN6 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx41Q91VN6 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC18.25■□□□□ 0.51
Ddx41Q91VN6 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx41Q91VN6 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx41Q91VN6 Slc35b2-202ENSMUST00000223987 1766 ntBASIC18.25■□□□□ 0.51
Ddx41Q91VN6 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ddx41Q91VN6 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ddx41Q91VN6 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ddx41Q91VN6 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ddx41Q91VN6 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
Ddx41Q91VN6 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ddx41Q91VN6 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ddx41Q91VN6 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC18.24■□□□□ 0.51
Ddx41Q91VN6 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ddx41Q91VN6 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ddx41Q91VN6 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC18.24■□□□□ 0.51
Ddx41Q91VN6 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ddx41Q91VN6 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ddx41Q91VN6 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ddx41Q91VN6 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ddx41Q91VN6 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx41Q91VN6 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx41Q91VN6 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC18.23■□□□□ 0.51
Ddx41Q91VN6 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx41Q91VN6 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Ddx41Q91VN6 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx41Q91VN6 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx41Q91VN6 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx41Q91VN6 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx41Q91VN6 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx41Q91VN6 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx41Q91VN6 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC18.23■□□□□ 0.51
Ddx41Q91VN6 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx41Q91VN6 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx41Q91VN6 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx41Q91VN6 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC18.23■□□□□ 0.51
Ddx41Q91VN6 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC18.23■□□□□ 0.51
Ddx41Q91VN6 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC18.23■□□□□ 0.51
Ddx41Q91VN6 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
Ddx41Q91VN6 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx41Q91VN6 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx41Q91VN6 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx41Q91VN6 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx41Q91VN6 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC18.23■□□□□ 0.51
Ddx41Q91VN6 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ddx41Q91VN6 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ddx41Q91VN6 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ddx41Q91VN6 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC18.22■□□□□ 0.51
Ddx41Q91VN6 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ddx41Q91VN6 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC18.22■□□□□ 0.51
Ddx41Q91VN6 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC18.22■□□□□ 0.51
Ddx41Q91VN6 CT009713.7-201ENSMUST00000224689 571 ntBASIC18.22■□□□□ 0.51
Ddx41Q91VN6 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Ddx41Q91VN6 Rps4l-201ENSMUST00000071745 943 ntBASIC18.22■□□□□ 0.51
Ddx41Q91VN6 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC18.22■□□□□ 0.51
Ddx41Q91VN6 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ddx41Q91VN6 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ddx41Q91VN6 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ddx41Q91VN6 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ddx41Q91VN6 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ddx41Q91VN6 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ddx41Q91VN6 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ddx41Q91VN6 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ddx41Q91VN6 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ddx41Q91VN6 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ddx41Q91VN6 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ddx41Q91VN6 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ddx41Q91VN6 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ddx41Q91VN6 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Ddx41Q91VN6 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Ddx41Q91VN6 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Ddx41Q91VN6 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ddx41Q91VN6 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC18.21■□□□□ 0.51
Ddx41Q91VN6 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Ddx41Q91VN6 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ddx41Q91VN6 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC18.21■□□□□ 0.51
Ddx41Q91VN6 Gm6296-201ENSMUST00000222599 943 ntBASIC18.21■□□□□ 0.51
Ddx41Q91VN6 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC18.21■□□□□ 0.51
Ddx41Q91VN6 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ddx41Q91VN6 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ddx41Q91VN6 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Ddx41Q91VN6 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ddx41Q91VN6 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ddx41Q91VN6 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC18.21■□□□□ 0.51
Ddx41Q91VN6 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ddx41Q91VN6 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ddx41Q91VN6 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ddx41Q91VN6 Gm9889-202ENSMUST00000206983 1577 ntBASIC18.21■□□□□ 0.51
Ddx41Q91VN6 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.5
Ddx41Q91VN6 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.5
Ddx41Q91VN6 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
Ddx41Q91VN6 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms