Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb17Q91VD8 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb17Q91VD8 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb17Q91VD8 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb17Q91VD8 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb17Q91VD8 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.57■□□□□ 0.24
Pcdhb17Q91VD8 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.57■□□□□ 0.24
Pcdhb17Q91VD8 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb17Q91VD8 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb17Q91VD8 Gm649-201ENSMUST00000117284 1054 ntBASIC16.57■□□□□ 0.24
Pcdhb17Q91VD8 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.57■□□□□ 0.24
Pcdhb17Q91VD8 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb17Q91VD8 Gm31831-201ENSMUST00000196240 684 ntTSL 3 BASIC16.57■□□□□ 0.24
Pcdhb17Q91VD8 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb17Q91VD8 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb17Q91VD8 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb17Q91VD8 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb17Q91VD8 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb17Q91VD8 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Pcdhb17Q91VD8 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb17Q91VD8 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Pcdhb17Q91VD8 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.57■□□□□ 0.24
Pcdhb17Q91VD8 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.56■□□□□ 0.24
Pcdhb17Q91VD8 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb17Q91VD8 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb17Q91VD8 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb17Q91VD8 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb17Q91VD8 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Pcdhb17Q91VD8 Gm38157-201ENSMUST00000194178 1698 ntBASIC16.56■□□□□ 0.24
Pcdhb17Q91VD8 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb17Q91VD8 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Pcdhb17Q91VD8 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb17Q91VD8 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb17Q91VD8 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb17Q91VD8 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb17Q91VD8 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
Pcdhb17Q91VD8 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb17Q91VD8 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb17Q91VD8 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Pcdhb17Q91VD8 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC16.56■□□□□ 0.24
Pcdhb17Q91VD8 Gm12702-201ENSMUST00000123258 612 ntTSL 3 BASIC16.56■□□□□ 0.24
Pcdhb17Q91VD8 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb17Q91VD8 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Pcdhb17Q91VD8 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.56■□□□□ 0.24
Pcdhb17Q91VD8 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb17Q91VD8 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Pcdhb17Q91VD8 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.56■□□□□ 0.24
Pcdhb17Q91VD8 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
Pcdhb17Q91VD8 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb17Q91VD8 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb17Q91VD8 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb17Q91VD8 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb17Q91VD8 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Pcdhb17Q91VD8 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb17Q91VD8 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb17Q91VD8 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.56■□□□□ 0.24
Pcdhb17Q91VD8 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC16.56■□□□□ 0.24
Pcdhb17Q91VD8 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb17Q91VD8 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb17Q91VD8 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb17Q91VD8 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb17Q91VD8 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb17Q91VD8 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb17Q91VD8 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb17Q91VD8 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb17Q91VD8 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb17Q91VD8 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb17Q91VD8 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Pcdhb17Q91VD8 Gm5970-201ENSMUST00000131638 1216 ntBASIC16.55■□□□□ 0.24
Pcdhb17Q91VD8 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.55■□□□□ 0.24
Pcdhb17Q91VD8 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb17Q91VD8 Gm22923-201ENSMUST00000174952 110 ntBASIC16.55■□□□□ 0.24
Pcdhb17Q91VD8 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.55■□□□□ 0.24
Pcdhb17Q91VD8 Gm27867-201ENSMUST00000184778 125 ntBASIC16.55■□□□□ 0.24
Pcdhb17Q91VD8 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb17Q91VD8 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb17Q91VD8 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb17Q91VD8 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb17Q91VD8 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb17Q91VD8 Gm26226-201ENSMUST00000082509 116 ntBASIC16.55■□□□□ 0.24
Pcdhb17Q91VD8 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb17Q91VD8 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb17Q91VD8 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb17Q91VD8 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb17Q91VD8 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Pcdhb17Q91VD8 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb17Q91VD8 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb17Q91VD8 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb17Q91VD8 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Pcdhb17Q91VD8 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb17Q91VD8 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb17Q91VD8 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.54■□□□□ 0.24
Pcdhb17Q91VD8 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb17Q91VD8 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb17Q91VD8 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.54■□□□□ 0.24
Pcdhb17Q91VD8 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.54■□□□□ 0.24
Pcdhb17Q91VD8 Gm8679-201ENSMUST00000210651 1036 ntBASIC16.54■□□□□ 0.24
Pcdhb17Q91VD8 AC129597.1-201ENSMUST00000223046 1234 ntBASIC16.54■□□□□ 0.24
Pcdhb17Q91VD8 Spr-ps1-201ENSMUST00000089584 605 ntBASIC16.54■□□□□ 0.24
Pcdhb17Q91VD8 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms