Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
H1fooQ8VIK3 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H1fooQ8VIK3 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
H1fooQ8VIK3 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
H1fooQ8VIK3 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
H1fooQ8VIK3 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
H1fooQ8VIK3 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
H1fooQ8VIK3 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
H1fooQ8VIK3 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
H1fooQ8VIK3 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H1fooQ8VIK3 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H1fooQ8VIK3 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
H1fooQ8VIK3 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H1fooQ8VIK3 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC13.37□□□□□ -0.27
H1fooQ8VIK3 Gm6623-201ENSMUST00000173570 544 ntBASIC13.37□□□□□ -0.27
H1fooQ8VIK3 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
H1fooQ8VIK3 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC13.37□□□□□ -0.27
H1fooQ8VIK3 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H1fooQ8VIK3 Gm44430-201ENSMUST00000203376 995 ntBASIC13.37□□□□□ -0.27
H1fooQ8VIK3 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
H1fooQ8VIK3 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H1fooQ8VIK3 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H1fooQ8VIK3 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H1fooQ8VIK3 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
H1fooQ8VIK3 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H1fooQ8VIK3 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H1fooQ8VIK3 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC13.37□□□□□ -0.27
H1fooQ8VIK3 Zkscan4-202ENSMUST00000225845 1506 ntBASIC13.37□□□□□ -0.27
H1fooQ8VIK3 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
H1fooQ8VIK3 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
H1fooQ8VIK3 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
H1fooQ8VIK3 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H1fooQ8VIK3 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
H1fooQ8VIK3 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H1fooQ8VIK3 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
H1fooQ8VIK3 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H1fooQ8VIK3 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H1fooQ8VIK3 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H1fooQ8VIK3 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H1fooQ8VIK3 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
H1fooQ8VIK3 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H1fooQ8VIK3 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
H1fooQ8VIK3 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
H1fooQ8VIK3 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
H1fooQ8VIK3 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H1fooQ8VIK3 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
H1fooQ8VIK3 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H1fooQ8VIK3 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H1fooQ8VIK3 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H1fooQ8VIK3 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
H1fooQ8VIK3 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H1fooQ8VIK3 Ntrk2-205ENSMUST00000224402 2284 ntBASIC13.36□□□□□ -0.27
H1fooQ8VIK3 AC093043.3-201ENSMUST00000226531 2273 ntBASIC13.36□□□□□ -0.27
H1fooQ8VIK3 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
H1fooQ8VIK3 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
H1fooQ8VIK3 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H1fooQ8VIK3 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
H1fooQ8VIK3 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
H1fooQ8VIK3 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
H1fooQ8VIK3 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
H1fooQ8VIK3 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H1fooQ8VIK3 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H1fooQ8VIK3 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H1fooQ8VIK3 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H1fooQ8VIK3 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
H1fooQ8VIK3 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
H1fooQ8VIK3 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H1fooQ8VIK3 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H1fooQ8VIK3 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
H1fooQ8VIK3 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
H1fooQ8VIK3 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
H1fooQ8VIK3 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
H1fooQ8VIK3 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H1fooQ8VIK3 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
H1fooQ8VIK3 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H1fooQ8VIK3 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H1fooQ8VIK3 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H1fooQ8VIK3 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H1fooQ8VIK3 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H1fooQ8VIK3 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
H1fooQ8VIK3 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H1fooQ8VIK3 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
H1fooQ8VIK3 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC13.35□□□□□ -0.27
H1fooQ8VIK3 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H1fooQ8VIK3 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC13.35□□□□□ -0.27
H1fooQ8VIK3 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H1fooQ8VIK3 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H1fooQ8VIK3 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
H1fooQ8VIK3 Gm5587-201ENSMUST00000206270 674 ntBASIC13.35□□□□□ -0.27
H1fooQ8VIK3 AC121577.1-201ENSMUST00000227302 707 ntBASIC13.35□□□□□ -0.27
H1fooQ8VIK3 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H1fooQ8VIK3 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
H1fooQ8VIK3 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H1fooQ8VIK3 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H1fooQ8VIK3 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H1fooQ8VIK3 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
H1fooQ8VIK3 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H1fooQ8VIK3 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
H1fooQ8VIK3 Gm9889-202ENSMUST00000206983 1577 ntBASIC13.35□□□□□ -0.27
H1fooQ8VIK3 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms