Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
Rab40cQ8VHQ4 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rab40cQ8VHQ4 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC13.05□□□□□ -0.32
Rab40cQ8VHQ4 Gm5643-201ENSMUST00000117081 966 ntBASIC13.05□□□□□ -0.32
Rab40cQ8VHQ4 Gm15378-201ENSMUST00000121894 207 ntBASIC13.05□□□□□ -0.32
Rab40cQ8VHQ4 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Rab40cQ8VHQ4 Zfp264-201ENSMUST00000208656 1563 ntBASIC13.05□□□□□ -0.32
Rab40cQ8VHQ4 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Rab40cQ8VHQ4 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC13.05□□□□□ -0.32
Rab40cQ8VHQ4 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rab40cQ8VHQ4 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rab40cQ8VHQ4 Gm42901-201ENSMUST00000197735 3171 ntBASIC13.05□□□□□ -0.32
Rab40cQ8VHQ4 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Rab40cQ8VHQ4 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rab40cQ8VHQ4 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rab40cQ8VHQ4 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rab40cQ8VHQ4 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rab40cQ8VHQ4 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rab40cQ8VHQ4 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Rab40cQ8VHQ4 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rab40cQ8VHQ4 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rab40cQ8VHQ4 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC13.04□□□□□ -0.32
Rab40cQ8VHQ4 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rab40cQ8VHQ4 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rab40cQ8VHQ4 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rab40cQ8VHQ4 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rab40cQ8VHQ4 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
Rab40cQ8VHQ4 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rab40cQ8VHQ4 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rab40cQ8VHQ4 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC13.04□□□□□ -0.32
Rab40cQ8VHQ4 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rab40cQ8VHQ4 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rab40cQ8VHQ4 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rab40cQ8VHQ4 Spcs1-207ENSMUST00000228767 1008 ntBASIC13.04□□□□□ -0.32
Rab40cQ8VHQ4 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rab40cQ8VHQ4 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rab40cQ8VHQ4 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC13.04□□□□□ -0.32
Rab40cQ8VHQ4 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rab40cQ8VHQ4 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rab40cQ8VHQ4 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Rab40cQ8VHQ4 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC13.04□□□□□ -0.32
Rab40cQ8VHQ4 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rab40cQ8VHQ4 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rab40cQ8VHQ4 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rab40cQ8VHQ4 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rab40cQ8VHQ4 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rab40cQ8VHQ4 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rab40cQ8VHQ4 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rab40cQ8VHQ4 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Rab40cQ8VHQ4 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Rab40cQ8VHQ4 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rab40cQ8VHQ4 Gm7712-202ENSMUST00000222331 1510 ntBASIC13.03□□□□□ -0.32
Rab40cQ8VHQ4 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rab40cQ8VHQ4 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rab40cQ8VHQ4 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rab40cQ8VHQ4 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rab40cQ8VHQ4 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rab40cQ8VHQ4 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rab40cQ8VHQ4 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rab40cQ8VHQ4 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC13.03□□□□□ -0.32
Rab40cQ8VHQ4 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rab40cQ8VHQ4 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Rab40cQ8VHQ4 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rab40cQ8VHQ4 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rab40cQ8VHQ4 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC13.03□□□□□ -0.32
Rab40cQ8VHQ4 Gm7791-201ENSMUST00000219066 539 ntBASIC13.03□□□□□ -0.32
Rab40cQ8VHQ4 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Rab40cQ8VHQ4 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rab40cQ8VHQ4 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rab40cQ8VHQ4 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rab40cQ8VHQ4 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rab40cQ8VHQ4 Gm37812-201ENSMUST00000195216 2475 ntBASIC13.03□□□□□ -0.32
Rab40cQ8VHQ4 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rab40cQ8VHQ4 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rab40cQ8VHQ4 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rab40cQ8VHQ4 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rab40cQ8VHQ4 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rab40cQ8VHQ4 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rab40cQ8VHQ4 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rab40cQ8VHQ4 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Rab40cQ8VHQ4 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rab40cQ8VHQ4 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rab40cQ8VHQ4 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rab40cQ8VHQ4 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rab40cQ8VHQ4 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rab40cQ8VHQ4 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC13.03□□□□□ -0.32
Rab40cQ8VHQ4 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rab40cQ8VHQ4 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rab40cQ8VHQ4 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Rab40cQ8VHQ4 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rab40cQ8VHQ4 Gm38327-201ENSMUST00000195852 1755 ntBASIC13.02□□□□□ -0.32
Rab40cQ8VHQ4 Slc35b2-202ENSMUST00000223987 1766 ntBASIC13.02□□□□□ -0.32
Rab40cQ8VHQ4 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rab40cQ8VHQ4 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rab40cQ8VHQ4 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rab40cQ8VHQ4 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rab40cQ8VHQ4 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rab40cQ8VHQ4 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rab40cQ8VHQ4 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC13.02□□□□□ -0.33
Rab40cQ8VHQ4 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms