Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rpap2Q8VC34 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.48■□□□□ 0.39
Rpap2Q8VC34 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rpap2Q8VC34 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rpap2Q8VC34 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rpap2Q8VC34 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rpap2Q8VC34 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rpap2Q8VC34 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
Rpap2Q8VC34 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rpap2Q8VC34 Gm9172-201ENSMUST00000212092 954 ntBASIC17.48■□□□□ 0.39
Rpap2Q8VC34 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rpap2Q8VC34 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rpap2Q8VC34 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC17.48■□□□□ 0.39
Rpap2Q8VC34 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rpap2Q8VC34 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rpap2Q8VC34 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rpap2Q8VC34 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Rpap2Q8VC34 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rpap2Q8VC34 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC17.47■□□□□ 0.39
Rpap2Q8VC34 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rpap2Q8VC34 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rpap2Q8VC34 Wnt10b-206ENSMUST00000228546 2709 ntBASIC17.47■□□□□ 0.39
Rpap2Q8VC34 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
Rpap2Q8VC34 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rpap2Q8VC34 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rpap2Q8VC34 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC17.47■□□□□ 0.39
Rpap2Q8VC34 Gm27867-201ENSMUST00000184778 125 ntBASIC17.47■□□□□ 0.39
Rpap2Q8VC34 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rpap2Q8VC34 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rpap2Q8VC34 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.47■□□□□ 0.39
Rpap2Q8VC34 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Rpap2Q8VC34 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rpap2Q8VC34 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rpap2Q8VC34 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rpap2Q8VC34 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rpap2Q8VC34 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rpap2Q8VC34 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rpap2Q8VC34 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rpap2Q8VC34 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.46■□□□□ 0.39
Rpap2Q8VC34 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.46■□□□□ 0.39
Rpap2Q8VC34 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rpap2Q8VC34 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC17.46■□□□□ 0.39
Rpap2Q8VC34 Gm25745-201ENSMUST00000174945 133 ntBASIC17.46■□□□□ 0.39
Rpap2Q8VC34 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rpap2Q8VC34 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.46■□□□□ 0.39
Rpap2Q8VC34 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rpap2Q8VC34 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rpap2Q8VC34 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rpap2Q8VC34 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.46■□□□□ 0.39
Rpap2Q8VC34 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Rpap2Q8VC34 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Rpap2Q8VC34 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Rpap2Q8VC34 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rpap2Q8VC34 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rpap2Q8VC34 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rpap2Q8VC34 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Rpap2Q8VC34 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rpap2Q8VC34 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rpap2Q8VC34 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.45■□□□□ 0.38
Rpap2Q8VC34 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rpap2Q8VC34 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC17.45■□□□□ 0.38
Rpap2Q8VC34 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.45■□□□□ 0.38
Rpap2Q8VC34 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
Rpap2Q8VC34 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rpap2Q8VC34 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rpap2Q8VC34 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rpap2Q8VC34 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rpap2Q8VC34 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rpap2Q8VC34 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rpap2Q8VC34 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rpap2Q8VC34 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Rpap2Q8VC34 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rpap2Q8VC34 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC17.44■□□□□ 0.38
Rpap2Q8VC34 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rpap2Q8VC34 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rpap2Q8VC34 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
Rpap2Q8VC34 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rpap2Q8VC34 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Rpap2Q8VC34 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC17.44■□□□□ 0.38
Rpap2Q8VC34 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC17.44■□□□□ 0.38
Rpap2Q8VC34 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.44■□□□□ 0.38
Rpap2Q8VC34 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rpap2Q8VC34 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rpap2Q8VC34 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC17.44■□□□□ 0.38
Rpap2Q8VC34 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
Rpap2Q8VC34 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rpap2Q8VC34 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rpap2Q8VC34 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Rpap2Q8VC34 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rpap2Q8VC34 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
Rpap2Q8VC34 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rpap2Q8VC34 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rpap2Q8VC34 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rpap2Q8VC34 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rpap2Q8VC34 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rpap2Q8VC34 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rpap2Q8VC34 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Rpap2Q8VC34 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
Rpap2Q8VC34 Gm28033-201ENSMUST00000184224 96 ntBASIC17.43■□□□□ 0.38
Rpap2Q8VC34 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms