Protein–RNA interactions for Protein: Q8R2N0

Ccdc59, Thyroid transcription factor 1-associated protein 26, mousemouse

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc59Q8R2N0 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
Ccdc59Q8R2N0 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc59Q8R2N0 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc59Q8R2N0 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc59Q8R2N0 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.15■□□□□ 0.02
Ccdc59Q8R2N0 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc59Q8R2N0 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Ccdc59Q8R2N0 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.15■□□□□ 0.02
Ccdc59Q8R2N0 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc59Q8R2N0 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc59Q8R2N0 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc59Q8R2N0 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc59Q8R2N0 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc59Q8R2N0 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Ccdc59Q8R2N0 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc59Q8R2N0 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc59Q8R2N0 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc59Q8R2N0 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc59Q8R2N0 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Ccdc59Q8R2N0 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.14■□□□□ 0.01
Ccdc59Q8R2N0 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc59Q8R2N0 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc59Q8R2N0 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc59Q8R2N0 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc59Q8R2N0 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc59Q8R2N0 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC15.14■□□□□ 0.01
Ccdc59Q8R2N0 Gm24841-201ENSMUST00000158676 357 ntBASIC15.14■□□□□ 0.01
Ccdc59Q8R2N0 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC15.14■□□□□ 0.01
Ccdc59Q8R2N0 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc59Q8R2N0 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc59Q8R2N0 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc59Q8R2N0 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc59Q8R2N0 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc59Q8R2N0 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Ccdc59Q8R2N0 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc59Q8R2N0 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Ccdc59Q8R2N0 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.14■□□□□ 0.01
Ccdc59Q8R2N0 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Ccdc59Q8R2N0 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc59Q8R2N0 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc59Q8R2N0 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc59Q8R2N0 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc59Q8R2N0 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc59Q8R2N0 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc59Q8R2N0 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc59Q8R2N0 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc59Q8R2N0 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc59Q8R2N0 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc59Q8R2N0 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc59Q8R2N0 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc59Q8R2N0 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Ccdc59Q8R2N0 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Ccdc59Q8R2N0 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Ccdc59Q8R2N0 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Ccdc59Q8R2N0 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC15.13■□□□□ 0.01
Ccdc59Q8R2N0 Gm37025-201ENSMUST00000195159 829 ntBASIC15.13■□□□□ 0.01
Ccdc59Q8R2N0 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC15.13■□□□□ 0.01
Ccdc59Q8R2N0 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Ccdc59Q8R2N0 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc59Q8R2N0 AL590614.2-201ENSMUST00000225374 1937 ntBASIC15.13■□□□□ 0.01
Ccdc59Q8R2N0 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc59Q8R2N0 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc59Q8R2N0 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc59Q8R2N0 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc59Q8R2N0 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc59Q8R2N0 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.13■□□□□ 0.01
Ccdc59Q8R2N0 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc59Q8R2N0 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc59Q8R2N0 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc59Q8R2N0 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc59Q8R2N0 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC15.12■□□□□ 0.01
Ccdc59Q8R2N0 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc59Q8R2N0 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc59Q8R2N0 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc59Q8R2N0 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc59Q8R2N0 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc59Q8R2N0 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Ccdc59Q8R2N0 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc59Q8R2N0 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc59Q8R2N0 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC15.12■□□□□ 0.01
Ccdc59Q8R2N0 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC15.12■□□□□ 0.01
Ccdc59Q8R2N0 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC15.12■□□□□ 0.01
Ccdc59Q8R2N0 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc59Q8R2N0 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc59Q8R2N0 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Ccdc59Q8R2N0 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc59Q8R2N0 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc59Q8R2N0 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc59Q8R2N0 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc59Q8R2N0 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc59Q8R2N0 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc59Q8R2N0 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc59Q8R2N0 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc59Q8R2N0 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc59Q8R2N0 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Ccdc59Q8R2N0 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Ccdc59Q8R2N0 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc59Q8R2N0 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc59Q8R2N0 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc59Q8R2N0 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms