Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC20.33■□□□□ 0.85
Chmp7Q8R1T1 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Chmp7Q8R1T1 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Chmp7Q8R1T1 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Chmp7Q8R1T1 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC20.33■□□□□ 0.85
Chmp7Q8R1T1 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Chmp7Q8R1T1 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Chmp7Q8R1T1 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Chmp7Q8R1T1 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC20.33■□□□□ 0.84
Chmp7Q8R1T1 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Chmp7Q8R1T1 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC20.33■□□□□ 0.84
Chmp7Q8R1T1 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC20.33■□□□□ 0.84
Chmp7Q8R1T1 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chmp7Q8R1T1 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Chmp7Q8R1T1 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Chmp7Q8R1T1 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Chmp7Q8R1T1 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chmp7Q8R1T1 H2af-ps-201ENSMUST00000119066 295 ntBASIC20.32■□□□□ 0.84
Chmp7Q8R1T1 AC151286.1-201ENSMUST00000198489 145 ntBASIC20.32■□□□□ 0.84
Chmp7Q8R1T1 Gm19164-201ENSMUST00000210667 640 ntBASIC20.32■□□□□ 0.84
Chmp7Q8R1T1 Gm7787-201ENSMUST00000216858 688 ntBASIC20.32■□□□□ 0.84
Chmp7Q8R1T1 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Chmp7Q8R1T1 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Chmp7Q8R1T1 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Chmp7Q8R1T1 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Chmp7Q8R1T1 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chmp7Q8R1T1 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Chmp7Q8R1T1 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chmp7Q8R1T1 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chmp7Q8R1T1 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chmp7Q8R1T1 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chmp7Q8R1T1 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chmp7Q8R1T1 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC20.31■□□□□ 0.84
Chmp7Q8R1T1 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chmp7Q8R1T1 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Chmp7Q8R1T1 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chmp7Q8R1T1 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Chmp7Q8R1T1 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chmp7Q8R1T1 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC20.31■□□□□ 0.84
Chmp7Q8R1T1 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chmp7Q8R1T1 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
Chmp7Q8R1T1 Gm44945-201ENSMUST00000206764 1187 ntBASIC20.31■□□□□ 0.84
Chmp7Q8R1T1 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chmp7Q8R1T1 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Chmp7Q8R1T1 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chmp7Q8R1T1 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC20.31■□□□□ 0.84
Chmp7Q8R1T1 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chmp7Q8R1T1 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC20.31■□□□□ 0.84
Chmp7Q8R1T1 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chmp7Q8R1T1 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC20.31■□□□□ 0.84
Chmp7Q8R1T1 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chmp7Q8R1T1 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chmp7Q8R1T1 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Chmp7Q8R1T1 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC20.3■□□□□ 0.84
Chmp7Q8R1T1 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Chmp7Q8R1T1 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chmp7Q8R1T1 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chmp7Q8R1T1 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chmp7Q8R1T1 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chmp7Q8R1T1 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Chmp7Q8R1T1 Gm26308-201ENSMUST00000157768 69 ntBASIC20.3■□□□□ 0.84
Chmp7Q8R1T1 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Chmp7Q8R1T1 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Chmp7Q8R1T1 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chmp7Q8R1T1 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Chmp7Q8R1T1 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Chmp7Q8R1T1 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chmp7Q8R1T1 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Chmp7Q8R1T1 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chmp7Q8R1T1 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chmp7Q8R1T1 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chmp7Q8R1T1 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC20.3■□□□□ 0.84
Chmp7Q8R1T1 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC20.3■□□□□ 0.84
Chmp7Q8R1T1 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chmp7Q8R1T1 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chmp7Q8R1T1 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Chmp7Q8R1T1 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Chmp7Q8R1T1 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Chmp7Q8R1T1 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chmp7Q8R1T1 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Chmp7Q8R1T1 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chmp7Q8R1T1 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Chmp7Q8R1T1 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chmp7Q8R1T1 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Chmp7Q8R1T1 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Chmp7Q8R1T1 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chmp7Q8R1T1 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chmp7Q8R1T1 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Chmp7Q8R1T1 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC20.29■□□□□ 0.84
Chmp7Q8R1T1 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chmp7Q8R1T1 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Chmp7Q8R1T1 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Chmp7Q8R1T1 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Chmp7Q8R1T1 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Chmp7Q8R1T1 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Chmp7Q8R1T1 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chmp7Q8R1T1 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Chmp7Q8R1T1 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.29■□□□□ 0.84
Chmp7Q8R1T1 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chmp7Q8R1T1 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms