Protein–RNA interactions for Protein: Q8K558

Treml1, Trem-like transcript 1 protein, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml1Q8K558 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Treml1Q8K558 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Treml1Q8K558 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Treml1Q8K558 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Treml1Q8K558 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Treml1Q8K558 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Treml1Q8K558 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Treml1Q8K558 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Treml1Q8K558 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Treml1Q8K558 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC15.69■□□□□ 0.1
Treml1Q8K558 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Treml1Q8K558 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Treml1Q8K558 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Treml1Q8K558 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
Treml1Q8K558 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Treml1Q8K558 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Treml1Q8K558 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Treml1Q8K558 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Treml1Q8K558 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Treml1Q8K558 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Treml1Q8K558 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Treml1Q8K558 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Treml1Q8K558 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.69■□□□□ 0.1
Treml1Q8K558 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Treml1Q8K558 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Treml1Q8K558 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Treml1Q8K558 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Treml1Q8K558 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Treml1Q8K558 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Treml1Q8K558 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Treml1Q8K558 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Treml1Q8K558 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Treml1Q8K558 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Treml1Q8K558 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Treml1Q8K558 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Treml1Q8K558 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Treml1Q8K558 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Treml1Q8K558 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Treml1Q8K558 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Treml1Q8K558 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Treml1Q8K558 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Treml1Q8K558 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Treml1Q8K558 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Treml1Q8K558 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Treml1Q8K558 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.68■□□□□ 0.1
Treml1Q8K558 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Treml1Q8K558 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Treml1Q8K558 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Treml1Q8K558 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC15.68■□□□□ 0.1
Treml1Q8K558 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Treml1Q8K558 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.68■□□□□ 0.1
Treml1Q8K558 Gm25745-201ENSMUST00000174945 133 ntBASIC15.68■□□□□ 0.1
Treml1Q8K558 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Treml1Q8K558 Gm8349-201ENSMUST00000182720 1003 ntBASIC15.68■□□□□ 0.1
Treml1Q8K558 Gm34391-201ENSMUST00000203706 907 ntBASIC15.68■□□□□ 0.1
Treml1Q8K558 Gm7506-201ENSMUST00000207758 815 ntBASIC15.68■□□□□ 0.1
Treml1Q8K558 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC15.68■□□□□ 0.1
Treml1Q8K558 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Treml1Q8K558 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Treml1Q8K558 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Treml1Q8K558 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Treml1Q8K558 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.68■□□□□ 0.1
Treml1Q8K558 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Treml1Q8K558 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Treml1Q8K558 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Treml1Q8K558 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Treml1Q8K558 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.68■□□□□ 0.1
Treml1Q8K558 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Treml1Q8K558 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Treml1Q8K558 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Treml1Q8K558 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.67■□□□□ 0.1
Treml1Q8K558 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Treml1Q8K558 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Treml1Q8K558 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Treml1Q8K558 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Treml1Q8K558 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Treml1Q8K558 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Treml1Q8K558 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Treml1Q8K558 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Treml1Q8K558 Gm24589-201ENSMUST00000116692 94 ntBASIC15.67■□□□□ 0.1
Treml1Q8K558 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC15.67■□□□□ 0.1
Treml1Q8K558 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Treml1Q8K558 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.67■□□□□ 0.1
Treml1Q8K558 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC15.67■□□□□ 0.1
Treml1Q8K558 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC15.67■□□□□ 0.1
Treml1Q8K558 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC15.67■□□□□ 0.1
Treml1Q8K558 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Treml1Q8K558 AC108846.1-201ENSMUST00000214531 513 ntBASIC15.67■□□□□ 0.1
Treml1Q8K558 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Treml1Q8K558 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.67■□□□□ 0.1
Treml1Q8K558 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Treml1Q8K558 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Treml1Q8K558 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Treml1Q8K558 Grk6-207ENSMUST00000225925 2769 ntBASIC15.67■□□□□ 0.1
Treml1Q8K558 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Treml1Q8K558 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Treml1Q8K558 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Treml1Q8K558 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Treml1Q8K558 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Treml1Q8K558 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms