Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfwd3Q8CIK8 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
Rfwd3Q8CIK8 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rfwd3Q8CIK8 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rfwd3Q8CIK8 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Rfwd3Q8CIK8 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Rfwd3Q8CIK8 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rfwd3Q8CIK8 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rfwd3Q8CIK8 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Rfwd3Q8CIK8 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15□□□□□ -0.01
Rfwd3Q8CIK8 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rfwd3Q8CIK8 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Rfwd3Q8CIK8 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC15□□□□□ -0.01
Rfwd3Q8CIK8 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rfwd3Q8CIK8 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC15□□□□□ -0.01
Rfwd3Q8CIK8 Mir3081-201ENSMUST00000175305 84 ntBASIC15□□□□□ -0.01
Rfwd3Q8CIK8 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15□□□□□ -0.01
Rfwd3Q8CIK8 Gm17807-201ENSMUST00000186869 298 ntBASIC15□□□□□ -0.01
Rfwd3Q8CIK8 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rfwd3Q8CIK8 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC15□□□□□ -0.01
Rfwd3Q8CIK8 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rfwd3Q8CIK8 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rfwd3Q8CIK8 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC15□□□□□ -0.01
Rfwd3Q8CIK8 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rfwd3Q8CIK8 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Rfwd3Q8CIK8 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rfwd3Q8CIK8 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rfwd3Q8CIK8 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rfwd3Q8CIK8 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rfwd3Q8CIK8 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC15□□□□□ -0.01
Rfwd3Q8CIK8 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rfwd3Q8CIK8 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfwd3Q8CIK8 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfwd3Q8CIK8 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rfwd3Q8CIK8 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfwd3Q8CIK8 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfwd3Q8CIK8 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfwd3Q8CIK8 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfwd3Q8CIK8 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfwd3Q8CIK8 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rfwd3Q8CIK8 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.99□□□□□ -0.01
Rfwd3Q8CIK8 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfwd3Q8CIK8 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfwd3Q8CIK8 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfwd3Q8CIK8 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfwd3Q8CIK8 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rfwd3Q8CIK8 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfwd3Q8CIK8 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfwd3Q8CIK8 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfwd3Q8CIK8 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rfwd3Q8CIK8 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfwd3Q8CIK8 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Rfwd3Q8CIK8 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rfwd3Q8CIK8 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfwd3Q8CIK8 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Rfwd3Q8CIK8 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rfwd3Q8CIK8 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rfwd3Q8CIK8 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rfwd3Q8CIK8 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14.98□□□□□ -0.01
Rfwd3Q8CIK8 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rfwd3Q8CIK8 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.98□□□□□ -0.01
Rfwd3Q8CIK8 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rfwd3Q8CIK8 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rfwd3Q8CIK8 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rfwd3Q8CIK8 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rfwd3Q8CIK8 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC14.98□□□□□ -0.01
Rfwd3Q8CIK8 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Rfwd3Q8CIK8 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.98□□□□□ -0.01
Rfwd3Q8CIK8 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rfwd3Q8CIK8 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.98□□□□□ -0.01
Rfwd3Q8CIK8 Gm10459-201ENSMUST00000202708 1155 ntBASIC14.98□□□□□ -0.01
Rfwd3Q8CIK8 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rfwd3Q8CIK8 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC14.98□□□□□ -0.01
Rfwd3Q8CIK8 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rfwd3Q8CIK8 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rfwd3Q8CIK8 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.98□□□□□ -0.01
Rfwd3Q8CIK8 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Rfwd3Q8CIK8 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rfwd3Q8CIK8 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rfwd3Q8CIK8 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rfwd3Q8CIK8 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rfwd3Q8CIK8 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rfwd3Q8CIK8 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rfwd3Q8CIK8 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Rfwd3Q8CIK8 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Rfwd3Q8CIK8 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rfwd3Q8CIK8 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rfwd3Q8CIK8 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rfwd3Q8CIK8 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rfwd3Q8CIK8 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rfwd3Q8CIK8 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rfwd3Q8CIK8 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Rfwd3Q8CIK8 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC14.97□□□□□ -0.01
Rfwd3Q8CIK8 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC14.97□□□□□ -0.01
Rfwd3Q8CIK8 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC14.97□□□□□ -0.01
Rfwd3Q8CIK8 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rfwd3Q8CIK8 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rfwd3Q8CIK8 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rfwd3Q8CIK8 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rfwd3Q8CIK8 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms