Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Pcdhb7Q8CDY9 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.04■□□□□ 0.16
Pcdhb7Q8CDY9 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.04■□□□□ 0.16
Pcdhb7Q8CDY9 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb7Q8CDY9 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb7Q8CDY9 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb7Q8CDY9 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb7Q8CDY9 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb7Q8CDY9 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb7Q8CDY9 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb7Q8CDY9 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb7Q8CDY9 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb7Q8CDY9 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.04■□□□□ 0.16
Pcdhb7Q8CDY9 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb7Q8CDY9 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb7Q8CDY9 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb7Q8CDY9 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Pcdhb7Q8CDY9 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb7Q8CDY9 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb7Q8CDY9 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb7Q8CDY9 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.03■□□□□ 0.16
Pcdhb7Q8CDY9 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb7Q8CDY9 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb7Q8CDY9 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb7Q8CDY9 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.03■□□□□ 0.16
Pcdhb7Q8CDY9 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb7Q8CDY9 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb7Q8CDY9 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.03■□□□□ 0.16
Pcdhb7Q8CDY9 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.03■□□□□ 0.16
Pcdhb7Q8CDY9 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb7Q8CDY9 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.03■□□□□ 0.16
Pcdhb7Q8CDY9 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.03■□□□□ 0.16
Pcdhb7Q8CDY9 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb7Q8CDY9 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
Pcdhb7Q8CDY9 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.03■□□□□ 0.16
Pcdhb7Q8CDY9 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb7Q8CDY9 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.03■□□□□ 0.16
Pcdhb7Q8CDY9 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb7Q8CDY9 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb7Q8CDY9 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb7Q8CDY9 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb7Q8CDY9 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.03■□□□□ 0.16
Pcdhb7Q8CDY9 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb7Q8CDY9 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb7Q8CDY9 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb7Q8CDY9 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.03■□□□□ 0.16
Pcdhb7Q8CDY9 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb7Q8CDY9 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb7Q8CDY9 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.02■□□□□ 0.16
Pcdhb7Q8CDY9 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb7Q8CDY9 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb7Q8CDY9 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb7Q8CDY9 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb7Q8CDY9 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb7Q8CDY9 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb7Q8CDY9 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb7Q8CDY9 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb7Q8CDY9 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb7Q8CDY9 Prob1-201ENSMUST00000097619 3021 ntBASIC16.02■□□□□ 0.16
Pcdhb7Q8CDY9 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb7Q8CDY9 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.02■□□□□ 0.16
Pcdhb7Q8CDY9 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb7Q8CDY9 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.02■□□□□ 0.16
Pcdhb7Q8CDY9 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb7Q8CDY9 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Pcdhb7Q8CDY9 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC16.02■□□□□ 0.16
Pcdhb7Q8CDY9 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhb7Q8CDY9 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Pcdhb7Q8CDY9 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhb7Q8CDY9 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhb7Q8CDY9 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhb7Q8CDY9 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhb7Q8CDY9 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhb7Q8CDY9 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhb7Q8CDY9 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.01■□□□□ 0.15
Pcdhb7Q8CDY9 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb7Q8CDY9 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb7Q8CDY9 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb7Q8CDY9 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb7Q8CDY9 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.01■□□□□ 0.15
Pcdhb7Q8CDY9 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb7Q8CDY9 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb7Q8CDY9 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
Pcdhb7Q8CDY9 Mir770-201ENSMUST00000103252 94 ntBASIC16.01■□□□□ 0.15
Pcdhb7Q8CDY9 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb7Q8CDY9 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.01■□□□□ 0.15
Pcdhb7Q8CDY9 Gm25016-201ENSMUST00000158399 131 ntBASIC16.01■□□□□ 0.15
Pcdhb7Q8CDY9 Gm6623-201ENSMUST00000173570 544 ntBASIC16.01■□□□□ 0.15
Pcdhb7Q8CDY9 Gm5587-201ENSMUST00000206270 674 ntBASIC16.01■□□□□ 0.15
Pcdhb7Q8CDY9 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb7Q8CDY9 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb7Q8CDY9 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb7Q8CDY9 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Pcdhb7Q8CDY9 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb7Q8CDY9 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb7Q8CDY9 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb7Q8CDY9 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb7Q8CDY9 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb7Q8CDY9 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Pcdhb7Q8CDY9 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms