Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc38Q8CDN8 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc38Q8CDN8 Gm5587-201ENSMUST00000206270 674 ntBASIC17.73■□□□□ 0.43
Ccdc38Q8CDN8 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc38Q8CDN8 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc38Q8CDN8 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc38Q8CDN8 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
Ccdc38Q8CDN8 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc38Q8CDN8 Prob1-201ENSMUST00000097619 3021 ntBASIC17.73■□□□□ 0.43
Ccdc38Q8CDN8 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc38Q8CDN8 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc38Q8CDN8 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Ccdc38Q8CDN8 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc38Q8CDN8 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc38Q8CDN8 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Ccdc38Q8CDN8 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc38Q8CDN8 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc38Q8CDN8 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC17.72■□□□□ 0.43
Ccdc38Q8CDN8 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc38Q8CDN8 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc38Q8CDN8 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc38Q8CDN8 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc38Q8CDN8 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Ccdc38Q8CDN8 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc38Q8CDN8 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc38Q8CDN8 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc38Q8CDN8 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc38Q8CDN8 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc38Q8CDN8 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc38Q8CDN8 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.72■□□□□ 0.43
Ccdc38Q8CDN8 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc38Q8CDN8 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Ccdc38Q8CDN8 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.72■□□□□ 0.43
Ccdc38Q8CDN8 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc38Q8CDN8 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc38Q8CDN8 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc38Q8CDN8 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc38Q8CDN8 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc38Q8CDN8 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc38Q8CDN8 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc38Q8CDN8 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.71■□□□□ 0.43
Ccdc38Q8CDN8 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc38Q8CDN8 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc38Q8CDN8 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc38Q8CDN8 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc38Q8CDN8 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc38Q8CDN8 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc38Q8CDN8 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Ccdc38Q8CDN8 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc38Q8CDN8 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Ccdc38Q8CDN8 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc38Q8CDN8 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Ccdc38Q8CDN8 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Ccdc38Q8CDN8 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Ccdc38Q8CDN8 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Ccdc38Q8CDN8 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Ccdc38Q8CDN8 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc38Q8CDN8 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc38Q8CDN8 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc38Q8CDN8 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc38Q8CDN8 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc38Q8CDN8 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Ccdc38Q8CDN8 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC17.7■□□□□ 0.42
Ccdc38Q8CDN8 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc38Q8CDN8 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc38Q8CDN8 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Ccdc38Q8CDN8 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Ccdc38Q8CDN8 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC17.7■□□□□ 0.42
Ccdc38Q8CDN8 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc38Q8CDN8 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.7■□□□□ 0.42
Ccdc38Q8CDN8 Gm6623-201ENSMUST00000173570 544 ntBASIC17.7■□□□□ 0.42
Ccdc38Q8CDN8 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Ccdc38Q8CDN8 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc38Q8CDN8 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc38Q8CDN8 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc38Q8CDN8 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Ccdc38Q8CDN8 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc38Q8CDN8 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc38Q8CDN8 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc38Q8CDN8 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Ccdc38Q8CDN8 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc38Q8CDN8 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc38Q8CDN8 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc38Q8CDN8 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc38Q8CDN8 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc38Q8CDN8 Gm6345-202ENSMUST00000180900 204 ntBASIC17.69■□□□□ 0.42
Ccdc38Q8CDN8 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.69■□□□□ 0.42
Ccdc38Q8CDN8 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Ccdc38Q8CDN8 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc38Q8CDN8 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc38Q8CDN8 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc38Q8CDN8 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC17.69■□□□□ 0.42
Ccdc38Q8CDN8 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc38Q8CDN8 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc38Q8CDN8 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc38Q8CDN8 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc38Q8CDN8 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc38Q8CDN8 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc38Q8CDN8 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc38Q8CDN8 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms