Protein–RNA interactions for Protein: Q8CCE9

E4f1, Transcription factor E4F1, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4f1Q8CCE9 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
E4f1Q8CCE9 Gfra2-202ENSMUST00000227633 1480 ntBASIC18.72■□□□□ 0.59
E4f1Q8CCE9 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
E4f1Q8CCE9 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
E4f1Q8CCE9 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.72■□□□□ 0.59
E4f1Q8CCE9 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
E4f1Q8CCE9 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
E4f1Q8CCE9 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
E4f1Q8CCE9 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC18.72■□□□□ 0.59
E4f1Q8CCE9 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC18.72■□□□□ 0.59
E4f1Q8CCE9 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
E4f1Q8CCE9 AC138767.1-201ENSMUST00000222661 415 ntBASIC18.72■□□□□ 0.59
E4f1Q8CCE9 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
E4f1Q8CCE9 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
E4f1Q8CCE9 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
E4f1Q8CCE9 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
E4f1Q8CCE9 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
E4f1Q8CCE9 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
E4f1Q8CCE9 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
E4f1Q8CCE9 Gm45203-201ENSMUST00000206384 1831 ntBASIC18.72■□□□□ 0.59
E4f1Q8CCE9 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
E4f1Q8CCE9 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
E4f1Q8CCE9 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
E4f1Q8CCE9 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
E4f1Q8CCE9 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
E4f1Q8CCE9 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
E4f1Q8CCE9 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
E4f1Q8CCE9 Gm5712-201ENSMUST00000199748 1043 ntBASIC18.71■□□□□ 0.59
E4f1Q8CCE9 Gm13830-205ENSMUST00000201195 1155 ntBASIC18.71■□□□□ 0.59
E4f1Q8CCE9 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
E4f1Q8CCE9 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
E4f1Q8CCE9 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
E4f1Q8CCE9 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
E4f1Q8CCE9 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
E4f1Q8CCE9 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
E4f1Q8CCE9 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
E4f1Q8CCE9 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
E4f1Q8CCE9 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
E4f1Q8CCE9 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
E4f1Q8CCE9 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
E4f1Q8CCE9 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
E4f1Q8CCE9 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
E4f1Q8CCE9 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
E4f1Q8CCE9 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
E4f1Q8CCE9 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
E4f1Q8CCE9 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
E4f1Q8CCE9 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
E4f1Q8CCE9 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC18.7■□□□□ 0.58
E4f1Q8CCE9 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC18.7■□□□□ 0.58
E4f1Q8CCE9 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
E4f1Q8CCE9 Gm44357-201ENSMUST00000195897 142 ntBASIC18.7■□□□□ 0.58
E4f1Q8CCE9 Gm19658-201ENSMUST00000196231 138 ntBASIC18.7■□□□□ 0.58
E4f1Q8CCE9 Gm44367-201ENSMUST00000196836 138 ntBASIC18.7■□□□□ 0.58
E4f1Q8CCE9 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC18.7■□□□□ 0.58
E4f1Q8CCE9 Gm44350-201ENSMUST00000197197 138 ntBASIC18.7■□□□□ 0.58
E4f1Q8CCE9 Gm44390-201ENSMUST00000197533 144 ntBASIC18.7■□□□□ 0.58
E4f1Q8CCE9 Gm44313-201ENSMUST00000198018 138 ntBASIC18.7■□□□□ 0.58
E4f1Q8CCE9 Gm44486-201ENSMUST00000198508 138 ntBASIC18.7■□□□□ 0.58
E4f1Q8CCE9 Gm44314-201ENSMUST00000199263 138 ntBASIC18.7■□□□□ 0.58
E4f1Q8CCE9 Gm44394-201ENSMUST00000199558 138 ntBASIC18.7■□□□□ 0.58
E4f1Q8CCE9 Gm44484-201ENSMUST00000199873 138 ntBASIC18.7■□□□□ 0.58
E4f1Q8CCE9 Gm44466-201ENSMUST00000200264 138 ntBASIC18.7■□□□□ 0.58
E4f1Q8CCE9 Gm44359-201ENSMUST00000200671 138 ntBASIC18.7■□□□□ 0.58
E4f1Q8CCE9 Vti1a-206ENSMUST00000225529 1244 ntBASIC18.7■□□□□ 0.58
E4f1Q8CCE9 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
E4f1Q8CCE9 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
E4f1Q8CCE9 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
E4f1Q8CCE9 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
E4f1Q8CCE9 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
E4f1Q8CCE9 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC18.7■□□□□ 0.58
E4f1Q8CCE9 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
E4f1Q8CCE9 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC18.7■□□□□ 0.58
E4f1Q8CCE9 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
E4f1Q8CCE9 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
E4f1Q8CCE9 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC18.7■□□□□ 0.58
E4f1Q8CCE9 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
E4f1Q8CCE9 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
E4f1Q8CCE9 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
E4f1Q8CCE9 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
E4f1Q8CCE9 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC18.69■□□□□ 0.58
E4f1Q8CCE9 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
E4f1Q8CCE9 Gm1401-201ENSMUST00000122048 772 ntBASIC18.69■□□□□ 0.58
E4f1Q8CCE9 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC18.69■□□□□ 0.58
E4f1Q8CCE9 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC18.69■□□□□ 0.58
E4f1Q8CCE9 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC18.69■□□□□ 0.58
E4f1Q8CCE9 Mir5131-201ENSMUST00000175426 93 ntBASIC18.69■□□□□ 0.58
E4f1Q8CCE9 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC18.69■□□□□ 0.58
E4f1Q8CCE9 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
E4f1Q8CCE9 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
E4f1Q8CCE9 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
E4f1Q8CCE9 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC18.69■□□□□ 0.58
E4f1Q8CCE9 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC18.69■□□□□ 0.58
E4f1Q8CCE9 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
E4f1Q8CCE9 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC18.69■□□□□ 0.58
E4f1Q8CCE9 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
E4f1Q8CCE9 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
E4f1Q8CCE9 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC18.68■□□□□ 0.58
E4f1Q8CCE9 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
E4f1Q8CCE9 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
E4f1Q8CCE9 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms