Protein–RNA interactions for Protein: Q8C9F4

Gm9949, Predicted gene 9949, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm9949Q8C9F4 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Gm9949Q8C9F4 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm9949Q8C9F4 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Gm9949Q8C9F4 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm9949Q8C9F4 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Gm9949Q8C9F4 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm9949Q8C9F4 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm9949Q8C9F4 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm9949Q8C9F4 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm9949Q8C9F4 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Gm9949Q8C9F4 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm9949Q8C9F4 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm9949Q8C9F4 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Gm9949Q8C9F4 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Gm9949Q8C9F4 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC12.58□□□□□ -0.4
Gm9949Q8C9F4 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm9949Q8C9F4 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm9949Q8C9F4 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC12.57□□□□□ -0.4
Gm9949Q8C9F4 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm9949Q8C9F4 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Gm9949Q8C9F4 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Gm9949Q8C9F4 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm9949Q8C9F4 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm9949Q8C9F4 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Gm9949Q8C9F4 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Gm9949Q8C9F4 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm9949Q8C9F4 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm9949Q8C9F4 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Gm9949Q8C9F4 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm9949Q8C9F4 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Gm9949Q8C9F4 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC12.57□□□□□ -0.4
Gm9949Q8C9F4 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC12.57□□□□□ -0.4
Gm9949Q8C9F4 Gm27742-201ENSMUST00000184667 60 ntBASIC12.57□□□□□ -0.4
Gm9949Q8C9F4 Gm27704-201ENSMUST00000185094 107 ntBASIC12.57□□□□□ -0.4
Gm9949Q8C9F4 Gm33142-201ENSMUST00000193913 867 ntBASIC12.57□□□□□ -0.4
Gm9949Q8C9F4 AC114585.2-202ENSMUST00000228094 426 ntBASIC12.57□□□□□ -0.4
Gm9949Q8C9F4 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm9949Q8C9F4 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm9949Q8C9F4 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm9949Q8C9F4 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm9949Q8C9F4 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Gm9949Q8C9F4 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm9949Q8C9F4 Gm42901-201ENSMUST00000197735 3171 ntBASIC12.57□□□□□ -0.4
Gm9949Q8C9F4 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm9949Q8C9F4 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm9949Q8C9F4 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Gm9949Q8C9F4 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm9949Q8C9F4 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm9949Q8C9F4 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Gm9949Q8C9F4 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm9949Q8C9F4 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm9949Q8C9F4 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm9949Q8C9F4 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Gm9949Q8C9F4 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm9949Q8C9F4 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm9949Q8C9F4 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC12.57□□□□□ -0.4
Gm9949Q8C9F4 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Gm9949Q8C9F4 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm9949Q8C9F4 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Gm9949Q8C9F4 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC12.56□□□□□ -0.4
Gm9949Q8C9F4 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Gm9949Q8C9F4 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm9949Q8C9F4 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm9949Q8C9F4 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm9949Q8C9F4 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm9949Q8C9F4 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm9949Q8C9F4 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Gm9949Q8C9F4 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm9949Q8C9F4 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Gm9949Q8C9F4 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm9949Q8C9F4 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm9949Q8C9F4 Ighv6-1-201ENSMUST00000193612 343 ntBASIC12.56□□□□□ -0.4
Gm9949Q8C9F4 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Gm9949Q8C9F4 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
Gm9949Q8C9F4 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm9949Q8C9F4 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC12.56□□□□□ -0.4
Gm9949Q8C9F4 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm9949Q8C9F4 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Gm9949Q8C9F4 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm9949Q8C9F4 Gm38327-201ENSMUST00000195852 1755 ntBASIC12.56□□□□□ -0.4
Gm9949Q8C9F4 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm9949Q8C9F4 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Gm9949Q8C9F4 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm9949Q8C9F4 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm9949Q8C9F4 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Gm9949Q8C9F4 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm9949Q8C9F4 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm9949Q8C9F4 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm9949Q8C9F4 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Gm9949Q8C9F4 Ccdc166-201ENSMUST00000182172 2584 ntBASIC12.55□□□□□ -0.4
Gm9949Q8C9F4 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm9949Q8C9F4 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Gm9949Q8C9F4 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Gm9949Q8C9F4 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm9949Q8C9F4 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Gm9949Q8C9F4 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm9949Q8C9F4 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Gm9949Q8C9F4 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm9949Q8C9F4 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Gm9949Q8C9F4 AC153794.1-201ENSMUST00000169148 126 ntBASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms