Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc60Q8C4J0 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC20.32■□□□□ 0.84
Ccdc60Q8C4J0 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc60Q8C4J0 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc60Q8C4J0 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC20.32■□□□□ 0.84
Ccdc60Q8C4J0 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc60Q8C4J0 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc60Q8C4J0 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC20.32■□□□□ 0.84
Ccdc60Q8C4J0 Gm34391-201ENSMUST00000203706 907 ntBASIC20.32■□□□□ 0.84
Ccdc60Q8C4J0 Gm7506-201ENSMUST00000207758 815 ntBASIC20.32■□□□□ 0.84
Ccdc60Q8C4J0 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC20.32■□□□□ 0.84
Ccdc60Q8C4J0 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc60Q8C4J0 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc60Q8C4J0 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
Ccdc60Q8C4J0 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc60Q8C4J0 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc60Q8C4J0 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc60Q8C4J0 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc60Q8C4J0 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc60Q8C4J0 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc60Q8C4J0 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc60Q8C4J0 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc60Q8C4J0 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC20.31■□□□□ 0.84
Ccdc60Q8C4J0 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc60Q8C4J0 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc60Q8C4J0 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Ccdc60Q8C4J0 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC20.31■□□□□ 0.84
Ccdc60Q8C4J0 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc60Q8C4J0 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc60Q8C4J0 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc60Q8C4J0 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc60Q8C4J0 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Ccdc60Q8C4J0 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc60Q8C4J0 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc60Q8C4J0 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc60Q8C4J0 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc60Q8C4J0 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc60Q8C4J0 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc60Q8C4J0 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc60Q8C4J0 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc60Q8C4J0 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc60Q8C4J0 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc60Q8C4J0 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC20.3■□□□□ 0.84
Ccdc60Q8C4J0 AC069562.2-201ENSMUST00000224644 2146 ntBASIC20.3■□□□□ 0.84
Ccdc60Q8C4J0 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc60Q8C4J0 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc60Q8C4J0 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc60Q8C4J0 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc60Q8C4J0 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Ccdc60Q8C4J0 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc60Q8C4J0 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc60Q8C4J0 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc60Q8C4J0 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc60Q8C4J0 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc60Q8C4J0 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
Ccdc60Q8C4J0 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc60Q8C4J0 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc60Q8C4J0 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc60Q8C4J0 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc60Q8C4J0 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc60Q8C4J0 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc60Q8C4J0 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc60Q8C4J0 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc60Q8C4J0 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC20.29■□□□□ 0.84
Ccdc60Q8C4J0 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc60Q8C4J0 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc60Q8C4J0 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc60Q8C4J0 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc60Q8C4J0 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Ccdc60Q8C4J0 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC20.28■□□□□ 0.84
Ccdc60Q8C4J0 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc60Q8C4J0 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc60Q8C4J0 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc60Q8C4J0 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC20.28■□□□□ 0.84
Ccdc60Q8C4J0 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Ccdc60Q8C4J0 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc60Q8C4J0 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC20.28■□□□□ 0.84
Ccdc60Q8C4J0 Gm38327-201ENSMUST00000195852 1755 ntBASIC20.28■□□□□ 0.84
Ccdc60Q8C4J0 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc60Q8C4J0 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC20.28■□□□□ 0.84
Ccdc60Q8C4J0 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc60Q8C4J0 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc60Q8C4J0 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc60Q8C4J0 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc60Q8C4J0 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc60Q8C4J0 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc60Q8C4J0 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc60Q8C4J0 AC153526.5-201ENSMUST00000218661 2147 ntBASIC20.27■□□□□ 0.84
Ccdc60Q8C4J0 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc60Q8C4J0 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc60Q8C4J0 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc60Q8C4J0 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Ccdc60Q8C4J0 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc60Q8C4J0 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc60Q8C4J0 Gm24589-201ENSMUST00000116692 94 ntBASIC20.27■□□□□ 0.84
Ccdc60Q8C4J0 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc60Q8C4J0 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC20.27■□□□□ 0.84
Ccdc60Q8C4J0 Umpk-ps-201ENSMUST00000211897 827 ntBASIC20.27■□□□□ 0.84
Ccdc60Q8C4J0 AC160338.1-201ENSMUST00000214232 705 ntBASIC20.27■□□□□ 0.84
Ccdc60Q8C4J0 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms