Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp44Q8C2S0 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp44Q8C2S0 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp44Q8C2S0 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp44Q8C2S0 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp44Q8C2S0 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp44Q8C2S0 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Usp44Q8C2S0 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp44Q8C2S0 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Usp44Q8C2S0 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp44Q8C2S0 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Usp44Q8C2S0 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC18.63■□□□□ 0.57
Usp44Q8C2S0 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Usp44Q8C2S0 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp44Q8C2S0 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp44Q8C2S0 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp44Q8C2S0 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp44Q8C2S0 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC18.63■□□□□ 0.57
Usp44Q8C2S0 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp44Q8C2S0 Gm12497-201ENSMUST00000138778 237 ntBASIC18.63■□□□□ 0.57
Usp44Q8C2S0 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Usp44Q8C2S0 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Usp44Q8C2S0 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp44Q8C2S0 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp44Q8C2S0 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp44Q8C2S0 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp44Q8C2S0 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp44Q8C2S0 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp44Q8C2S0 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp44Q8C2S0 Prob1-201ENSMUST00000097619 3021 ntBASIC18.63■□□□□ 0.57
Usp44Q8C2S0 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp44Q8C2S0 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp44Q8C2S0 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Usp44Q8C2S0 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Usp44Q8C2S0 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp44Q8C2S0 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp44Q8C2S0 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Usp44Q8C2S0 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Usp44Q8C2S0 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp44Q8C2S0 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Usp44Q8C2S0 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Usp44Q8C2S0 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Usp44Q8C2S0 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Usp44Q8C2S0 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp44Q8C2S0 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp44Q8C2S0 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Usp44Q8C2S0 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp44Q8C2S0 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp44Q8C2S0 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp44Q8C2S0 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp44Q8C2S0 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp44Q8C2S0 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp44Q8C2S0 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Usp44Q8C2S0 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp44Q8C2S0 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Usp44Q8C2S0 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC18.61■□□□□ 0.57
Usp44Q8C2S0 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC18.61■□□□□ 0.57
Usp44Q8C2S0 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC18.61■□□□□ 0.57
Usp44Q8C2S0 Gm18622-201ENSMUST00000219361 595 ntBASIC18.61■□□□□ 0.57
Usp44Q8C2S0 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp44Q8C2S0 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp44Q8C2S0 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp44Q8C2S0 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp44Q8C2S0 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC18.61■□□□□ 0.57
Usp44Q8C2S0 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Usp44Q8C2S0 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp44Q8C2S0 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp44Q8C2S0 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
Usp44Q8C2S0 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC18.61■□□□□ 0.57
Usp44Q8C2S0 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC18.61■□□□□ 0.57
Usp44Q8C2S0 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp44Q8C2S0 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp44Q8C2S0 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp44Q8C2S0 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp44Q8C2S0 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp44Q8C2S0 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp44Q8C2S0 Gm44616-201ENSMUST00000206417 1732 ntBASIC18.6■□□□□ 0.57
Usp44Q8C2S0 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp44Q8C2S0 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp44Q8C2S0 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp44Q8C2S0 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC18.6■□□□□ 0.57
Usp44Q8C2S0 Gm17971-201ENSMUST00000190239 806 ntBASIC18.6■□□□□ 0.57
Usp44Q8C2S0 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC18.6■□□□□ 0.57
Usp44Q8C2S0 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC18.6■□□□□ 0.57
Usp44Q8C2S0 AC127302.2-201ENSMUST00000215212 268 ntBASIC18.6■□□□□ 0.57
Usp44Q8C2S0 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp44Q8C2S0 AC117588.1-201ENSMUST00000228510 999 ntBASIC18.6■□□□□ 0.57
Usp44Q8C2S0 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp44Q8C2S0 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC18.6■□□□□ 0.57
Usp44Q8C2S0 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Usp44Q8C2S0 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp44Q8C2S0 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp44Q8C2S0 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Usp44Q8C2S0 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp44Q8C2S0 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp44Q8C2S0 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp44Q8C2S0 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp44Q8C2S0 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Usp44Q8C2S0 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC18.59■□□□□ 0.57
Usp44Q8C2S0 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms