Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sh3rf3Q8C120 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
Sh3rf3Q8C120 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sh3rf3Q8C120 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Sh3rf3Q8C120 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sh3rf3Q8C120 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Sh3rf3Q8C120 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sh3rf3Q8C120 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.61■□□□□ 0.25
Sh3rf3Q8C120 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sh3rf3Q8C120 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sh3rf3Q8C120 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sh3rf3Q8C120 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sh3rf3Q8C120 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.61■□□□□ 0.25
Sh3rf3Q8C120 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.61■□□□□ 0.25
Sh3rf3Q8C120 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Sh3rf3Q8C120 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sh3rf3Q8C120 Gm27742-201ENSMUST00000184667 60 ntBASIC16.61■□□□□ 0.25
Sh3rf3Q8C120 Gm33142-201ENSMUST00000193913 867 ntBASIC16.61■□□□□ 0.25
Sh3rf3Q8C120 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sh3rf3Q8C120 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sh3rf3Q8C120 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.61■□□□□ 0.25
Sh3rf3Q8C120 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Sh3rf3Q8C120 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sh3rf3Q8C120 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sh3rf3Q8C120 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Sh3rf3Q8C120 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sh3rf3Q8C120 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sh3rf3Q8C120 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sh3rf3Q8C120 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sh3rf3Q8C120 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sh3rf3Q8C120 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Sh3rf3Q8C120 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.6■□□□□ 0.25
Sh3rf3Q8C120 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sh3rf3Q8C120 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Sh3rf3Q8C120 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.6■□□□□ 0.25
Sh3rf3Q8C120 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sh3rf3Q8C120 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sh3rf3Q8C120 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sh3rf3Q8C120 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sh3rf3Q8C120 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Sh3rf3Q8C120 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sh3rf3Q8C120 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Sh3rf3Q8C120 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Sh3rf3Q8C120 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sh3rf3Q8C120 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sh3rf3Q8C120 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sh3rf3Q8C120 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sh3rf3Q8C120 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Sh3rf3Q8C120 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sh3rf3Q8C120 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sh3rf3Q8C120 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.59■□□□□ 0.25
Sh3rf3Q8C120 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sh3rf3Q8C120 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Sh3rf3Q8C120 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.59■□□□□ 0.25
Sh3rf3Q8C120 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Sh3rf3Q8C120 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Sh3rf3Q8C120 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sh3rf3Q8C120 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sh3rf3Q8C120 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sh3rf3Q8C120 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Sh3rf3Q8C120 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sh3rf3Q8C120 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sh3rf3Q8C120 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sh3rf3Q8C120 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sh3rf3Q8C120 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sh3rf3Q8C120 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Sh3rf3Q8C120 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sh3rf3Q8C120 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sh3rf3Q8C120 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sh3rf3Q8C120 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sh3rf3Q8C120 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Sh3rf3Q8C120 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Sh3rf3Q8C120 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Sh3rf3Q8C120 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Sh3rf3Q8C120 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.25
Sh3rf3Q8C120 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sh3rf3Q8C120 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.58■□□□□ 0.24
Sh3rf3Q8C120 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.58■□□□□ 0.24
Sh3rf3Q8C120 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.58■□□□□ 0.24
Sh3rf3Q8C120 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Sh3rf3Q8C120 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sh3rf3Q8C120 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sh3rf3Q8C120 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sh3rf3Q8C120 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Sh3rf3Q8C120 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Sh3rf3Q8C120 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sh3rf3Q8C120 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Sh3rf3Q8C120 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
Sh3rf3Q8C120 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sh3rf3Q8C120 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sh3rf3Q8C120 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sh3rf3Q8C120 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.58■□□□□ 0.24
Sh3rf3Q8C120 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sh3rf3Q8C120 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.58■□□□□ 0.24
Sh3rf3Q8C120 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Sh3rf3Q8C120 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sh3rf3Q8C120 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sh3rf3Q8C120 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sh3rf3Q8C120 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sh3rf3Q8C120 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms