Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chd9Q8BYH8 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC12.48□□□□□ -0.41
Chd9Q8BYH8 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Chd9Q8BYH8 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chd9Q8BYH8 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Chd9Q8BYH8 Gm10253-201ENSMUST00000194270 940 ntBASIC12.48□□□□□ -0.41
Chd9Q8BYH8 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.48□□□□□ -0.41
Chd9Q8BYH8 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chd9Q8BYH8 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chd9Q8BYH8 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chd9Q8BYH8 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Chd9Q8BYH8 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chd9Q8BYH8 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Chd9Q8BYH8 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chd9Q8BYH8 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chd9Q8BYH8 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chd9Q8BYH8 Mir7684-201ENSMUST00000183858 60 ntBASIC12.47□□□□□ -0.41
Chd9Q8BYH8 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Chd9Q8BYH8 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Chd9Q8BYH8 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Chd9Q8BYH8 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chd9Q8BYH8 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chd9Q8BYH8 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Chd9Q8BYH8 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC12.47□□□□□ -0.41
Chd9Q8BYH8 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC12.47□□□□□ -0.41
Chd9Q8BYH8 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chd9Q8BYH8 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chd9Q8BYH8 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC12.47□□□□□ -0.41
Chd9Q8BYH8 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Chd9Q8BYH8 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Chd9Q8BYH8 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chd9Q8BYH8 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chd9Q8BYH8 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chd9Q8BYH8 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Chd9Q8BYH8 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC12.46□□□□□ -0.41
Chd9Q8BYH8 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Chd9Q8BYH8 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Chd9Q8BYH8 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.46□□□□□ -0.41
Chd9Q8BYH8 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Chd9Q8BYH8 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Chd9Q8BYH8 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Chd9Q8BYH8 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Chd9Q8BYH8 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Chd9Q8BYH8 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Chd9Q8BYH8 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Chd9Q8BYH8 Hivep3-201ENSMUST00000084306 2973 ntBASIC12.46□□□□□ -0.41
Chd9Q8BYH8 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Chd9Q8BYH8 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Chd9Q8BYH8 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC12.46□□□□□ -0.42
Chd9Q8BYH8 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Chd9Q8BYH8 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.42
Chd9Q8BYH8 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Chd9Q8BYH8 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Chd9Q8BYH8 Gm22065-201ENSMUST00000103753 110 ntBASIC12.46□□□□□ -0.42
Chd9Q8BYH8 Gm22066-201ENSMUST00000103761 110 ntBASIC12.46□□□□□ -0.42
Chd9Q8BYH8 Gm24932-201ENSMUST00000103763 110 ntBASIC12.46□□□□□ -0.42
Chd9Q8BYH8 Gm24115-201ENSMUST00000103799 110 ntBASIC12.46□□□□□ -0.42
Chd9Q8BYH8 Gm22190-201ENSMUST00000103827 110 ntBASIC12.46□□□□□ -0.42
Chd9Q8BYH8 Gm22191-201ENSMUST00000103831 110 ntBASIC12.46□□□□□ -0.42
Chd9Q8BYH8 Gm24721-201ENSMUST00000103849 110 ntBASIC12.46□□□□□ -0.42
Chd9Q8BYH8 Gm28018-201ENSMUST00000103869 110 ntBASIC12.46□□□□□ -0.42
Chd9Q8BYH8 Gm26399-201ENSMUST00000103937 110 ntBASIC12.46□□□□□ -0.42
Chd9Q8BYH8 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Chd9Q8BYH8 Gm25349-201ENSMUST00000177728 110 ntBASIC12.46□□□□□ -0.42
Chd9Q8BYH8 Gm23616-201ENSMUST00000177797 110 ntBASIC12.46□□□□□ -0.42
Chd9Q8BYH8 Gm25871-201ENSMUST00000177816 110 ntBASIC12.46□□□□□ -0.42
Chd9Q8BYH8 Gm24752-201ENSMUST00000178240 110 ntBASIC12.46□□□□□ -0.42
Chd9Q8BYH8 Gm24496-201ENSMUST00000178287 110 ntBASIC12.46□□□□□ -0.42
Chd9Q8BYH8 Gm25649-201ENSMUST00000178476 110 ntBASIC12.46□□□□□ -0.42
Chd9Q8BYH8 Gm25548-201ENSMUST00000178681 110 ntBASIC12.46□□□□□ -0.42
Chd9Q8BYH8 Gm23147-201ENSMUST00000178841 110 ntBASIC12.46□□□□□ -0.42
Chd9Q8BYH8 Gm26095-201ENSMUST00000179270 110 ntBASIC12.46□□□□□ -0.42
Chd9Q8BYH8 Gm22171-201ENSMUST00000179283 110 ntBASIC12.46□□□□□ -0.42
Chd9Q8BYH8 Gm23936-201ENSMUST00000179354 110 ntBASIC12.46□□□□□ -0.42
Chd9Q8BYH8 Gm22619-201ENSMUST00000179516 110 ntBASIC12.46□□□□□ -0.42
Chd9Q8BYH8 Gm25255-201ENSMUST00000179579 110 ntBASIC12.46□□□□□ -0.42
Chd9Q8BYH8 Gm24755-201ENSMUST00000179691 110 ntBASIC12.46□□□□□ -0.42
Chd9Q8BYH8 Gm26506-201ENSMUST00000179692 110 ntBASIC12.46□□□□□ -0.42
Chd9Q8BYH8 Gm25086-201ENSMUST00000179931 110 ntBASIC12.46□□□□□ -0.42
Chd9Q8BYH8 Gm23243-201ENSMUST00000180047 110 ntBASIC12.46□□□□□ -0.42
Chd9Q8BYH8 Gm24659-201ENSMUST00000180212 110 ntBASIC12.46□□□□□ -0.42
Chd9Q8BYH8 Gm24169-201ENSMUST00000180244 110 ntBASIC12.46□□□□□ -0.42
Chd9Q8BYH8 Gm23689-201ENSMUST00000180354 110 ntBASIC12.46□□□□□ -0.42
Chd9Q8BYH8 Gm27359-201ENSMUST00000184153 110 ntBASIC12.46□□□□□ -0.42
Chd9Q8BYH8 Gm27785-201ENSMUST00000184268 110 ntBASIC12.46□□□□□ -0.42
Chd9Q8BYH8 Gm27466-201ENSMUST00000184396 110 ntBASIC12.46□□□□□ -0.42
Chd9Q8BYH8 Gm27703-201ENSMUST00000184836 110 ntBASIC12.46□□□□□ -0.42
Chd9Q8BYH8 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC12.46□□□□□ -0.42
Chd9Q8BYH8 Gm5779-201ENSMUST00000218467 910 ntBASIC12.46□□□□□ -0.42
Chd9Q8BYH8 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Chd9Q8BYH8 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.42
Chd9Q8BYH8 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Chd9Q8BYH8 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Chd9Q8BYH8 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
Chd9Q8BYH8 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Chd9Q8BYH8 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chd9Q8BYH8 Syt7-205ENSMUST00000224135 1557 ntBASIC12.45□□□□□ -0.42
Chd9Q8BYH8 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Chd9Q8BYH8 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC12.45□□□□□ -0.42
Chd9Q8BYH8 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms