Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Gm17808-201ENSMUST00000200859 894 ntBASIC16.83■□□□□ 0.28
Trerf1Q8BXJ2 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Trerf1Q8BXJ2 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.83■□□□□ 0.28
Trerf1Q8BXJ2 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trerf1Q8BXJ2 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trerf1Q8BXJ2 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trerf1Q8BXJ2 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.83■□□□□ 0.28
Trerf1Q8BXJ2 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trerf1Q8BXJ2 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trerf1Q8BXJ2 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trerf1Q8BXJ2 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trerf1Q8BXJ2 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Trerf1Q8BXJ2 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trerf1Q8BXJ2 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trerf1Q8BXJ2 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trerf1Q8BXJ2 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trerf1Q8BXJ2 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.83■□□□□ 0.28
Trerf1Q8BXJ2 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trerf1Q8BXJ2 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trerf1Q8BXJ2 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trerf1Q8BXJ2 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Trerf1Q8BXJ2 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trerf1Q8BXJ2 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trerf1Q8BXJ2 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Trerf1Q8BXJ2 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trerf1Q8BXJ2 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trerf1Q8BXJ2 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trerf1Q8BXJ2 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Trerf1Q8BXJ2 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trerf1Q8BXJ2 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC16.82■□□□□ 0.28
Trerf1Q8BXJ2 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.82■□□□□ 0.28
Trerf1Q8BXJ2 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trerf1Q8BXJ2 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trerf1Q8BXJ2 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trerf1Q8BXJ2 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trerf1Q8BXJ2 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.82■□□□□ 0.28
Trerf1Q8BXJ2 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trerf1Q8BXJ2 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.82■□□□□ 0.28
Trerf1Q8BXJ2 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Trerf1Q8BXJ2 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trerf1Q8BXJ2 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.82■□□□□ 0.28
Trerf1Q8BXJ2 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trerf1Q8BXJ2 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Trerf1Q8BXJ2 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trerf1Q8BXJ2 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trerf1Q8BXJ2 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trerf1Q8BXJ2 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trerf1Q8BXJ2 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trerf1Q8BXJ2 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trerf1Q8BXJ2 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Trerf1Q8BXJ2 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trerf1Q8BXJ2 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trerf1Q8BXJ2 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trerf1Q8BXJ2 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trerf1Q8BXJ2 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trerf1Q8BXJ2 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trerf1Q8BXJ2 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trerf1Q8BXJ2 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trerf1Q8BXJ2 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Trerf1Q8BXJ2 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trerf1Q8BXJ2 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Trerf1Q8BXJ2 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.81■□□□□ 0.28
Trerf1Q8BXJ2 Gm14859-201ENSMUST00000117752 357 ntBASIC16.81■□□□□ 0.28
Trerf1Q8BXJ2 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.81■□□□□ 0.28
Trerf1Q8BXJ2 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.81■□□□□ 0.28
Trerf1Q8BXJ2 Gm29707-201ENSMUST00000196325 491 ntBASIC16.81■□□□□ 0.28
Trerf1Q8BXJ2 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.81■□□□□ 0.28
Trerf1Q8BXJ2 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Trerf1Q8BXJ2 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trerf1Q8BXJ2 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.81■□□□□ 0.28
Trerf1Q8BXJ2 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trerf1Q8BXJ2 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trerf1Q8BXJ2 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trerf1Q8BXJ2 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trerf1Q8BXJ2 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trerf1Q8BXJ2 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Trerf1Q8BXJ2 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trerf1Q8BXJ2 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trerf1Q8BXJ2 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trerf1Q8BXJ2 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Trerf1Q8BXJ2 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Trerf1Q8BXJ2 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trerf1Q8BXJ2 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Trerf1Q8BXJ2 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trerf1Q8BXJ2 Gm11950-201ENSMUST00000121615 838 ntBASIC16.8■□□□□ 0.28
Trerf1Q8BXJ2 Gm6623-201ENSMUST00000173570 544 ntBASIC16.8■□□□□ 0.28
Trerf1Q8BXJ2 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trerf1Q8BXJ2 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.8■□□□□ 0.28
Trerf1Q8BXJ2 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trerf1Q8BXJ2 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trerf1Q8BXJ2 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Trerf1Q8BXJ2 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trerf1Q8BXJ2 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Trerf1Q8BXJ2 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trerf1Q8BXJ2 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trerf1Q8BXJ2 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trerf1Q8BXJ2 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trerf1Q8BXJ2 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Trerf1Q8BXJ2 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Trerf1Q8BXJ2 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms