Protein–RNA interactions for Protein: Q8BVF4

Ccdc30, Coiled-coil domain-containing protein 30, mousemouse

Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc30Q8BVF4 Gm16011-201ENSMUST00000121567 2662 ntBASIC20.57■□□□□ 0.88
Ccdc30Q8BVF4 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc30Q8BVF4 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc30Q8BVF4 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc30Q8BVF4 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc30Q8BVF4 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc30Q8BVF4 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc30Q8BVF4 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc30Q8BVF4 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc30Q8BVF4 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Ccdc30Q8BVF4 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc30Q8BVF4 Vti1a-206ENSMUST00000225529 1244 ntBASIC20.56■□□□□ 0.88
Ccdc30Q8BVF4 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc30Q8BVF4 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc30Q8BVF4 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc30Q8BVF4 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC20.56■□□□□ 0.88
Ccdc30Q8BVF4 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc30Q8BVF4 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc30Q8BVF4 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc30Q8BVF4 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc30Q8BVF4 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc30Q8BVF4 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc30Q8BVF4 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Ccdc30Q8BVF4 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc30Q8BVF4 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Ccdc30Q8BVF4 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc30Q8BVF4 Gm15372-201ENSMUST00000120729 834 ntBASIC20.55■□□□□ 0.88
Ccdc30Q8BVF4 Gm12895-201ENSMUST00000122214 226 ntBASIC20.55■□□□□ 0.88
Ccdc30Q8BVF4 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC20.55■□□□□ 0.88
Ccdc30Q8BVF4 Gm21362-201ENSMUST00000194272 928 ntBASIC20.55■□□□□ 0.88
Ccdc30Q8BVF4 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC20.55■□□□□ 0.88
Ccdc30Q8BVF4 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC20.55■□□□□ 0.88
Ccdc30Q8BVF4 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC20.55■□□□□ 0.88
Ccdc30Q8BVF4 AC130671.1-201ENSMUST00000227384 1237 ntBASIC20.55■□□□□ 0.88
Ccdc30Q8BVF4 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC20.55■□□□□ 0.88
Ccdc30Q8BVF4 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc30Q8BVF4 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc30Q8BVF4 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc30Q8BVF4 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc30Q8BVF4 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc30Q8BVF4 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc30Q8BVF4 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc30Q8BVF4 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc30Q8BVF4 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc30Q8BVF4 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
Ccdc30Q8BVF4 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc30Q8BVF4 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc30Q8BVF4 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc30Q8BVF4 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc30Q8BVF4 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC20.54■□□□□ 0.88
Ccdc30Q8BVF4 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Ccdc30Q8BVF4 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Ccdc30Q8BVF4 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
Ccdc30Q8BVF4 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc30Q8BVF4 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc30Q8BVF4 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc30Q8BVF4 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc30Q8BVF4 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc30Q8BVF4 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Ccdc30Q8BVF4 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc30Q8BVF4 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc30Q8BVF4 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc30Q8BVF4 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc30Q8BVF4 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC20.53■□□□□ 0.88
Ccdc30Q8BVF4 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc30Q8BVF4 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc30Q8BVF4 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc30Q8BVF4 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
Ccdc30Q8BVF4 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc30Q8BVF4 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc30Q8BVF4 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc30Q8BVF4 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc30Q8BVF4 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc30Q8BVF4 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC20.53■□□□□ 0.88
Ccdc30Q8BVF4 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc30Q8BVF4 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc30Q8BVF4 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC20.53■□□□□ 0.88
Ccdc30Q8BVF4 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc30Q8BVF4 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc30Q8BVF4 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc30Q8BVF4 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc30Q8BVF4 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc30Q8BVF4 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc30Q8BVF4 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc30Q8BVF4 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc30Q8BVF4 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc30Q8BVF4 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc30Q8BVF4 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc30Q8BVF4 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc30Q8BVF4 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc30Q8BVF4 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc30Q8BVF4 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Ccdc30Q8BVF4 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Ccdc30Q8BVF4 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Ccdc30Q8BVF4 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC20.52■□□□□ 0.87
Ccdc30Q8BVF4 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc30Q8BVF4 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC20.51■□□□□ 0.87
Ccdc30Q8BVF4 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc30Q8BVF4 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc30Q8BVF4 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms