Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcal1Q8BJL0 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcal1Q8BJL0 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcal1Q8BJL0 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcal1Q8BJL0 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcal1Q8BJL0 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.92■□□□□ 0.3
Smarcal1Q8BJL0 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcal1Q8BJL0 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcal1Q8BJL0 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcal1Q8BJL0 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Smarcal1Q8BJL0 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Smarcal1Q8BJL0 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcal1Q8BJL0 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcal1Q8BJL0 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcal1Q8BJL0 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcal1Q8BJL0 Gm26308-201ENSMUST00000157768 69 ntBASIC16.91■□□□□ 0.3
Smarcal1Q8BJL0 Gm44945-201ENSMUST00000206764 1187 ntBASIC16.91■□□□□ 0.3
Smarcal1Q8BJL0 Gm45167-201ENSMUST00000208007 322 ntBASIC16.91■□□□□ 0.3
Smarcal1Q8BJL0 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcal1Q8BJL0 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcal1Q8BJL0 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcal1Q8BJL0 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcal1Q8BJL0 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Smarcal1Q8BJL0 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Smarcal1Q8BJL0 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcal1Q8BJL0 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcal1Q8BJL0 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Smarcal1Q8BJL0 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcal1Q8BJL0 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.91■□□□□ 0.3
Smarcal1Q8BJL0 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcal1Q8BJL0 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Smarcal1Q8BJL0 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcal1Q8BJL0 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcal1Q8BJL0 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcal1Q8BJL0 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcal1Q8BJL0 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcal1Q8BJL0 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcal1Q8BJL0 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcal1Q8BJL0 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Smarcal1Q8BJL0 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcal1Q8BJL0 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcal1Q8BJL0 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcal1Q8BJL0 Gm19164-201ENSMUST00000210667 640 ntBASIC16.9■□□□□ 0.3
Smarcal1Q8BJL0 Bloc1s5-203ENSMUST00000224902 612 ntBASIC16.9■□□□□ 0.3
Smarcal1Q8BJL0 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Smarcal1Q8BJL0 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcal1Q8BJL0 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcal1Q8BJL0 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcal1Q8BJL0 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Smarcal1Q8BJL0 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcal1Q8BJL0 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcal1Q8BJL0 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Smarcal1Q8BJL0 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcal1Q8BJL0 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcal1Q8BJL0 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcal1Q8BJL0 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Smarcal1Q8BJL0 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcal1Q8BJL0 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcal1Q8BJL0 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcal1Q8BJL0 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcal1Q8BJL0 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcal1Q8BJL0 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.89■□□□□ 0.29
Smarcal1Q8BJL0 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcal1Q8BJL0 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Smarcal1Q8BJL0 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcal1Q8BJL0 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC16.89■□□□□ 0.29
Smarcal1Q8BJL0 Gm6257-201ENSMUST00000163864 910 ntBASIC16.89■□□□□ 0.29
Smarcal1Q8BJL0 Gm18489-201ENSMUST00000172565 551 ntBASIC16.89■□□□□ 0.29
Smarcal1Q8BJL0 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Smarcal1Q8BJL0 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC16.89■□□□□ 0.29
Smarcal1Q8BJL0 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC16.89■□□□□ 0.29
Smarcal1Q8BJL0 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Smarcal1Q8BJL0 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
Smarcal1Q8BJL0 Gm7787-201ENSMUST00000216858 688 ntBASIC16.89■□□□□ 0.29
Smarcal1Q8BJL0 Gm15500-202ENSMUST00000071641 1019 ntBASIC16.89■□□□□ 0.29
Smarcal1Q8BJL0 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcal1Q8BJL0 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcal1Q8BJL0 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.89■□□□□ 0.29
Smarcal1Q8BJL0 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcal1Q8BJL0 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcal1Q8BJL0 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
Smarcal1Q8BJL0 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcal1Q8BJL0 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.89■□□□□ 0.29
Smarcal1Q8BJL0 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.88■□□□□ 0.29
Smarcal1Q8BJL0 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcal1Q8BJL0 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Smarcal1Q8BJL0 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcal1Q8BJL0 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcal1Q8BJL0 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC16.88■□□□□ 0.29
Smarcal1Q8BJL0 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcal1Q8BJL0 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcal1Q8BJL0 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcal1Q8BJL0 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcal1Q8BJL0 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcal1Q8BJL0 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC16.88■□□□□ 0.29
Smarcal1Q8BJL0 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC16.88■□□□□ 0.29
Smarcal1Q8BJL0 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC16.88■□□□□ 0.29
Smarcal1Q8BJL0 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
Smarcal1Q8BJL0 Gm27300-201ENSMUST00000184085 97 ntBASIC16.88■□□□□ 0.29
Smarcal1Q8BJL0 Gm27335-201ENSMUST00000184758 97 ntBASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms