Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf38Q8BI21 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC15.41■□□□□ 0.06
Rnf38Q8BI21 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC15.41■□□□□ 0.06
Rnf38Q8BI21 Gm9987-201ENSMUST00000069768 567 ntBASIC15.41■□□□□ 0.06
Rnf38Q8BI21 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf38Q8BI21 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf38Q8BI21 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf38Q8BI21 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Rnf38Q8BI21 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf38Q8BI21 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Rnf38Q8BI21 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf38Q8BI21 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf38Q8BI21 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Rnf38Q8BI21 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf38Q8BI21 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf38Q8BI21 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf38Q8BI21 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf38Q8BI21 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf38Q8BI21 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Rnf38Q8BI21 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf38Q8BI21 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf38Q8BI21 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf38Q8BI21 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf38Q8BI21 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf38Q8BI21 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf38Q8BI21 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
Rnf38Q8BI21 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf38Q8BI21 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC15.4■□□□□ 0.06
Rnf38Q8BI21 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Rnf38Q8BI21 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf38Q8BI21 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf38Q8BI21 Mir5130-201ENSMUST00000175160 84 ntBASIC15.4■□□□□ 0.06
Rnf38Q8BI21 Mir7071-201ENSMUST00000184847 69 ntBASIC15.4■□□□□ 0.06
Rnf38Q8BI21 Gm45058-201ENSMUST00000205810 766 ntBASIC15.4■□□□□ 0.06
Rnf38Q8BI21 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Rnf38Q8BI21 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf38Q8BI21 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Rnf38Q8BI21 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf38Q8BI21 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf38Q8BI21 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf38Q8BI21 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf38Q8BI21 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Rnf38Q8BI21 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.39■□□□□ 0.06
Rnf38Q8BI21 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rnf38Q8BI21 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Rnf38Q8BI21 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rnf38Q8BI21 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rnf38Q8BI21 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rnf38Q8BI21 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rnf38Q8BI21 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rnf38Q8BI21 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rnf38Q8BI21 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rnf38Q8BI21 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Rnf38Q8BI21 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Rnf38Q8BI21 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Rnf38Q8BI21 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
Rnf38Q8BI21 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rnf38Q8BI21 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Rnf38Q8BI21 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Rnf38Q8BI21 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Rnf38Q8BI21 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC15.39■□□□□ 0.05
Rnf38Q8BI21 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rnf38Q8BI21 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rnf38Q8BI21 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.39■□□□□ 0.05
Rnf38Q8BI21 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf38Q8BI21 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Rnf38Q8BI21 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf38Q8BI21 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf38Q8BI21 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf38Q8BI21 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf38Q8BI21 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf38Q8BI21 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf38Q8BI21 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf38Q8BI21 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
Rnf38Q8BI21 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Rnf38Q8BI21 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Rnf38Q8BI21 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Rnf38Q8BI21 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Rnf38Q8BI21 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Rnf38Q8BI21 Mir1668-201ENSMUST00000184114 107 ntBASIC15.38■□□□□ 0.05
Rnf38Q8BI21 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Rnf38Q8BI21 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Rnf38Q8BI21 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf38Q8BI21 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf38Q8BI21 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf38Q8BI21 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf38Q8BI21 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf38Q8BI21 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Rnf38Q8BI21 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf38Q8BI21 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf38Q8BI21 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf38Q8BI21 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf38Q8BI21 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf38Q8BI21 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf38Q8BI21 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf38Q8BI21 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf38Q8BI21 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf38Q8BI21 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf38Q8BI21 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf38Q8BI21 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms