Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim23Q8BGX0 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim23Q8BGX0 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim23Q8BGX0 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trim23Q8BGX0 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim23Q8BGX0 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim23Q8BGX0 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim23Q8BGX0 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.35■□□□□ 0.05
Trim23Q8BGX0 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC15.35■□□□□ 0.05
Trim23Q8BGX0 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim23Q8BGX0 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim23Q8BGX0 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC15.35■□□□□ 0.05
Trim23Q8BGX0 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC15.35■□□□□ 0.05
Trim23Q8BGX0 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim23Q8BGX0 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC15.35■□□□□ 0.05
Trim23Q8BGX0 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim23Q8BGX0 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Trim23Q8BGX0 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC15.35■□□□□ 0.05
Trim23Q8BGX0 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim23Q8BGX0 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim23Q8BGX0 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trim23Q8BGX0 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim23Q8BGX0 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim23Q8BGX0 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim23Q8BGX0 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC15.35■□□□□ 0.05
Trim23Q8BGX0 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim23Q8BGX0 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trim23Q8BGX0 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.35■□□□□ 0.05
Trim23Q8BGX0 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.34■□□□□ 0.05
Trim23Q8BGX0 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trim23Q8BGX0 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.34■□□□□ 0.05
Trim23Q8BGX0 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim23Q8BGX0 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim23Q8BGX0 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15.34■□□□□ 0.05
Trim23Q8BGX0 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim23Q8BGX0 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim23Q8BGX0 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim23Q8BGX0 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trim23Q8BGX0 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC15.34■□□□□ 0.05
Trim23Q8BGX0 Gm6296-201ENSMUST00000222599 943 ntBASIC15.34■□□□□ 0.05
Trim23Q8BGX0 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim23Q8BGX0 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim23Q8BGX0 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim23Q8BGX0 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim23Q8BGX0 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim23Q8BGX0 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trim23Q8BGX0 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim23Q8BGX0 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim23Q8BGX0 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim23Q8BGX0 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trim23Q8BGX0 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim23Q8BGX0 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim23Q8BGX0 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim23Q8BGX0 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim23Q8BGX0 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim23Q8BGX0 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trim23Q8BGX0 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trim23Q8BGX0 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trim23Q8BGX0 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trim23Q8BGX0 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Trim23Q8BGX0 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC15.33■□□□□ 0.05
Trim23Q8BGX0 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trim23Q8BGX0 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trim23Q8BGX0 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trim23Q8BGX0 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trim23Q8BGX0 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.33■□□□□ 0.04
Trim23Q8BGX0 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trim23Q8BGX0 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.33■□□□□ 0.04
Trim23Q8BGX0 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trim23Q8BGX0 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim23Q8BGX0 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim23Q8BGX0 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.33■□□□□ 0.04
Trim23Q8BGX0 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim23Q8BGX0 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim23Q8BGX0 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Trim23Q8BGX0 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim23Q8BGX0 Gm44357-201ENSMUST00000195897 142 ntBASIC15.33■□□□□ 0.04
Trim23Q8BGX0 Gm19658-201ENSMUST00000196231 138 ntBASIC15.33■□□□□ 0.04
Trim23Q8BGX0 Gm44367-201ENSMUST00000196836 138 ntBASIC15.33■□□□□ 0.04
Trim23Q8BGX0 Gm44350-201ENSMUST00000197197 138 ntBASIC15.33■□□□□ 0.04
Trim23Q8BGX0 Gm44390-201ENSMUST00000197533 144 ntBASIC15.33■□□□□ 0.04
Trim23Q8BGX0 Gm44313-201ENSMUST00000198018 138 ntBASIC15.33■□□□□ 0.04
Trim23Q8BGX0 Gm44486-201ENSMUST00000198508 138 ntBASIC15.33■□□□□ 0.04
Trim23Q8BGX0 Gm44314-201ENSMUST00000199263 138 ntBASIC15.33■□□□□ 0.04
Trim23Q8BGX0 Gm44394-201ENSMUST00000199558 138 ntBASIC15.33■□□□□ 0.04
Trim23Q8BGX0 Gm44484-201ENSMUST00000199873 138 ntBASIC15.33■□□□□ 0.04
Trim23Q8BGX0 Gm44466-201ENSMUST00000200264 138 ntBASIC15.33■□□□□ 0.04
Trim23Q8BGX0 Gm44359-201ENSMUST00000200671 138 ntBASIC15.33■□□□□ 0.04
Trim23Q8BGX0 Gm8655-201ENSMUST00000221159 852 ntBASIC15.33■□□□□ 0.04
Trim23Q8BGX0 Rps4l-201ENSMUST00000071745 943 ntBASIC15.33■□□□□ 0.04
Trim23Q8BGX0 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Trim23Q8BGX0 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim23Q8BGX0 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
Trim23Q8BGX0 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim23Q8BGX0 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim23Q8BGX0 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim23Q8BGX0 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim23Q8BGX0 Gm8784-201ENSMUST00000222096 1435 ntBASIC15.33■□□□□ 0.04
Trim23Q8BGX0 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trim23Q8BGX0 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms