Protein–RNA interactions for Protein: Q8BGJ9

U2af1l4, Splicing factor U2AF 26 kDa subunit, mousemouse

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1l4Q8BGJ9 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
U2af1l4Q8BGJ9 AC069562.2-201ENSMUST00000224644 2146 ntBASIC18.77■□□□□ 0.6
U2af1l4Q8BGJ9 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
U2af1l4Q8BGJ9 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
U2af1l4Q8BGJ9 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
U2af1l4Q8BGJ9 Gm32996-201ENSMUST00000199828 1447 ntBASIC18.76■□□□□ 0.59
U2af1l4Q8BGJ9 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
U2af1l4Q8BGJ9 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
U2af1l4Q8BGJ9 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
U2af1l4Q8BGJ9 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
U2af1l4Q8BGJ9 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
U2af1l4Q8BGJ9 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC18.76■□□□□ 0.59
U2af1l4Q8BGJ9 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC18.76■□□□□ 0.59
U2af1l4Q8BGJ9 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC18.76■□□□□ 0.59
U2af1l4Q8BGJ9 Gm27702-201ENSMUST00000184512 56 ntBASIC18.76■□□□□ 0.59
U2af1l4Q8BGJ9 Gm7063-201ENSMUST00000186840 981 ntBASIC18.76■□□□□ 0.59
U2af1l4Q8BGJ9 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC18.76■□□□□ 0.59
U2af1l4Q8BGJ9 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
U2af1l4Q8BGJ9 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
U2af1l4Q8BGJ9 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
U2af1l4Q8BGJ9 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
U2af1l4Q8BGJ9 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
U2af1l4Q8BGJ9 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
U2af1l4Q8BGJ9 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
U2af1l4Q8BGJ9 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
U2af1l4Q8BGJ9 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
U2af1l4Q8BGJ9 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
U2af1l4Q8BGJ9 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
U2af1l4Q8BGJ9 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
U2af1l4Q8BGJ9 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC18.75■□□□□ 0.59
U2af1l4Q8BGJ9 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
U2af1l4Q8BGJ9 Gm5364-201ENSMUST00000216789 889 ntBASIC18.75■□□□□ 0.59
U2af1l4Q8BGJ9 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
U2af1l4Q8BGJ9 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
U2af1l4Q8BGJ9 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
U2af1l4Q8BGJ9 Gm42918-201ENSMUST00000199249 1580 ntBASIC18.75■□□□□ 0.59
U2af1l4Q8BGJ9 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
U2af1l4Q8BGJ9 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
U2af1l4Q8BGJ9 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
U2af1l4Q8BGJ9 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
U2af1l4Q8BGJ9 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
U2af1l4Q8BGJ9 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
U2af1l4Q8BGJ9 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
U2af1l4Q8BGJ9 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC18.74■□□□□ 0.59
U2af1l4Q8BGJ9 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
U2af1l4Q8BGJ9 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
U2af1l4Q8BGJ9 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
U2af1l4Q8BGJ9 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
U2af1l4Q8BGJ9 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
U2af1l4Q8BGJ9 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
U2af1l4Q8BGJ9 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC18.74■□□□□ 0.59
U2af1l4Q8BGJ9 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC18.74■□□□□ 0.59
U2af1l4Q8BGJ9 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
U2af1l4Q8BGJ9 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC18.74■□□□□ 0.59
U2af1l4Q8BGJ9 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
U2af1l4Q8BGJ9 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
U2af1l4Q8BGJ9 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
U2af1l4Q8BGJ9 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
U2af1l4Q8BGJ9 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
U2af1l4Q8BGJ9 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
U2af1l4Q8BGJ9 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
U2af1l4Q8BGJ9 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
U2af1l4Q8BGJ9 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
U2af1l4Q8BGJ9 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
U2af1l4Q8BGJ9 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
U2af1l4Q8BGJ9 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
U2af1l4Q8BGJ9 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
U2af1l4Q8BGJ9 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
U2af1l4Q8BGJ9 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC18.73■□□□□ 0.59
U2af1l4Q8BGJ9 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
U2af1l4Q8BGJ9 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
U2af1l4Q8BGJ9 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
U2af1l4Q8BGJ9 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
U2af1l4Q8BGJ9 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
U2af1l4Q8BGJ9 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
U2af1l4Q8BGJ9 Gm5264-201ENSMUST00000190584 848 ntBASIC18.73■□□□□ 0.59
U2af1l4Q8BGJ9 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
U2af1l4Q8BGJ9 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
U2af1l4Q8BGJ9 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
U2af1l4Q8BGJ9 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
U2af1l4Q8BGJ9 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
U2af1l4Q8BGJ9 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC18.73■□□□□ 0.59
U2af1l4Q8BGJ9 Dancr-204ENSMUST00000132389 2347 ntBASIC18.73■□□□□ 0.59
U2af1l4Q8BGJ9 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
U2af1l4Q8BGJ9 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
U2af1l4Q8BGJ9 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
U2af1l4Q8BGJ9 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
U2af1l4Q8BGJ9 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
U2af1l4Q8BGJ9 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
U2af1l4Q8BGJ9 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
U2af1l4Q8BGJ9 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
U2af1l4Q8BGJ9 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC18.72■□□□□ 0.59
U2af1l4Q8BGJ9 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC18.72■□□□□ 0.59
U2af1l4Q8BGJ9 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC18.72■□□□□ 0.59
U2af1l4Q8BGJ9 Gm12350-201ENSMUST00000121208 462 ntBASIC18.72■□□□□ 0.59
U2af1l4Q8BGJ9 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC18.72■□□□□ 0.59
U2af1l4Q8BGJ9 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC18.72■□□□□ 0.59
U2af1l4Q8BGJ9 Gm6736-201ENSMUST00000166583 948 ntBASIC18.72■□□□□ 0.59
U2af1l4Q8BGJ9 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
U2af1l4Q8BGJ9 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms