Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC18.71■□□□□ 0.59
Samm50Q8BGH2 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC18.71■□□□□ 0.59
Samm50Q8BGH2 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC18.71■□□□□ 0.59
Samm50Q8BGH2 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Samm50Q8BGH2 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Samm50Q8BGH2 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC18.71■□□□□ 0.59
Samm50Q8BGH2 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Samm50Q8BGH2 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Samm50Q8BGH2 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Samm50Q8BGH2 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Samm50Q8BGH2 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Samm50Q8BGH2 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Samm50Q8BGH2 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Samm50Q8BGH2 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Samm50Q8BGH2 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Samm50Q8BGH2 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC18.71■□□□□ 0.59
Samm50Q8BGH2 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Samm50Q8BGH2 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Samm50Q8BGH2 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Samm50Q8BGH2 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Samm50Q8BGH2 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
Samm50Q8BGH2 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Samm50Q8BGH2 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Samm50Q8BGH2 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Samm50Q8BGH2 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Samm50Q8BGH2 App-207ENSMUST00000227737 2827 ntBASIC18.7■□□□□ 0.58
Samm50Q8BGH2 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Samm50Q8BGH2 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Samm50Q8BGH2 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC18.7■□□□□ 0.58
Samm50Q8BGH2 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Samm50Q8BGH2 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Samm50Q8BGH2 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC18.7■□□□□ 0.58
Samm50Q8BGH2 AC154471.1-201ENSMUST00000224418 436 ntBASIC18.7■□□□□ 0.58
Samm50Q8BGH2 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Samm50Q8BGH2 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Samm50Q8BGH2 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Samm50Q8BGH2 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Samm50Q8BGH2 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Samm50Q8BGH2 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Samm50Q8BGH2 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Samm50Q8BGH2 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Samm50Q8BGH2 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Samm50Q8BGH2 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Samm50Q8BGH2 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC18.69■□□□□ 0.58
Samm50Q8BGH2 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Samm50Q8BGH2 Gm44616-201ENSMUST00000206417 1732 ntBASIC18.69■□□□□ 0.58
Samm50Q8BGH2 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
Samm50Q8BGH2 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Samm50Q8BGH2 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Samm50Q8BGH2 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Samm50Q8BGH2 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Samm50Q8BGH2 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Samm50Q8BGH2 Gm42473-201ENSMUST00000201056 2291 ntBASIC18.69■□□□□ 0.58
Samm50Q8BGH2 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Samm50Q8BGH2 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Samm50Q8BGH2 Gm10819-201ENSMUST00000099988 561 ntBASIC18.69■□□□□ 0.58
Samm50Q8BGH2 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Samm50Q8BGH2 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Samm50Q8BGH2 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Samm50Q8BGH2 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Samm50Q8BGH2 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Samm50Q8BGH2 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Samm50Q8BGH2 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC18.69■□□□□ 0.58
Samm50Q8BGH2 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Samm50Q8BGH2 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Samm50Q8BGH2 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Samm50Q8BGH2 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC18.69■□□□□ 0.58
Samm50Q8BGH2 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Samm50Q8BGH2 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Samm50Q8BGH2 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Samm50Q8BGH2 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Samm50Q8BGH2 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
Samm50Q8BGH2 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Samm50Q8BGH2 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Samm50Q8BGH2 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Samm50Q8BGH2 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Samm50Q8BGH2 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Samm50Q8BGH2 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Samm50Q8BGH2 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC18.68■□□□□ 0.58
Samm50Q8BGH2 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Samm50Q8BGH2 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Samm50Q8BGH2 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Samm50Q8BGH2 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Samm50Q8BGH2 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Samm50Q8BGH2 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Samm50Q8BGH2 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Samm50Q8BGH2 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Samm50Q8BGH2 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Samm50Q8BGH2 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Samm50Q8BGH2 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC18.67■□□□□ 0.58
Samm50Q8BGH2 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC18.67■□□□□ 0.58
Samm50Q8BGH2 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Samm50Q8BGH2 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Samm50Q8BGH2 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Samm50Q8BGH2 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC18.67■□□□□ 0.58
Samm50Q8BGH2 Gm10459-201ENSMUST00000202708 1155 ntBASIC18.67■□□□□ 0.58
Samm50Q8BGH2 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Samm50Q8BGH2 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Samm50Q8BGH2 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Samm50Q8BGH2 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms