Protein–RNA interactions for Protein: Q8BFW4

Trim65, Tripartite motif-containing protein 65, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim65Q8BFW4 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim65Q8BFW4 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim65Q8BFW4 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.09■□□□□ 0.33
Trim65Q8BFW4 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Trim65Q8BFW4 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim65Q8BFW4 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17.09■□□□□ 0.33
Trim65Q8BFW4 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim65Q8BFW4 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim65Q8BFW4 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim65Q8BFW4 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim65Q8BFW4 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim65Q8BFW4 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Trim65Q8BFW4 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim65Q8BFW4 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim65Q8BFW4 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim65Q8BFW4 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim65Q8BFW4 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim65Q8BFW4 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim65Q8BFW4 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim65Q8BFW4 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim65Q8BFW4 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim65Q8BFW4 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim65Q8BFW4 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trim65Q8BFW4 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim65Q8BFW4 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim65Q8BFW4 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trim65Q8BFW4 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.08■□□□□ 0.32
Trim65Q8BFW4 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trim65Q8BFW4 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim65Q8BFW4 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trim65Q8BFW4 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim65Q8BFW4 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trim65Q8BFW4 Mir3081-201ENSMUST00000175305 84 ntBASIC17.08■□□□□ 0.32
Trim65Q8BFW4 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim65Q8BFW4 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim65Q8BFW4 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Trim65Q8BFW4 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Trim65Q8BFW4 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim65Q8BFW4 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim65Q8BFW4 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim65Q8BFW4 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC17.08■□□□□ 0.32
Trim65Q8BFW4 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim65Q8BFW4 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC17.08■□□□□ 0.32
Trim65Q8BFW4 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim65Q8BFW4 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Trim65Q8BFW4 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trim65Q8BFW4 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim65Q8BFW4 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim65Q8BFW4 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC17.07■□□□□ 0.32
Trim65Q8BFW4 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim65Q8BFW4 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim65Q8BFW4 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim65Q8BFW4 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim65Q8BFW4 Prob1-201ENSMUST00000097619 3021 ntBASIC17.07■□□□□ 0.32
Trim65Q8BFW4 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Trim65Q8BFW4 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.07■□□□□ 0.32
Trim65Q8BFW4 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.07■□□□□ 0.32
Trim65Q8BFW4 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trim65Q8BFW4 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim65Q8BFW4 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim65Q8BFW4 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trim65Q8BFW4 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim65Q8BFW4 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Trim65Q8BFW4 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trim65Q8BFW4 Gm38327-201ENSMUST00000195852 1755 ntBASIC17.07■□□□□ 0.32
Trim65Q8BFW4 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trim65Q8BFW4 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Trim65Q8BFW4 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim65Q8BFW4 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim65Q8BFW4 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim65Q8BFW4 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim65Q8BFW4 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim65Q8BFW4 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim65Q8BFW4 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim65Q8BFW4 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim65Q8BFW4 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.06■□□□□ 0.32
Trim65Q8BFW4 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim65Q8BFW4 Gm14859-201ENSMUST00000117752 357 ntBASIC17.06■□□□□ 0.32
Trim65Q8BFW4 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.06■□□□□ 0.32
Trim65Q8BFW4 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.06■□□□□ 0.32
Trim65Q8BFW4 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim65Q8BFW4 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Trim65Q8BFW4 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim65Q8BFW4 Gm21362-201ENSMUST00000194272 928 ntBASIC17.06■□□□□ 0.32
Trim65Q8BFW4 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim65Q8BFW4 Gm7367-201ENSMUST00000057611 492 ntBASIC17.06■□□□□ 0.32
Trim65Q8BFW4 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim65Q8BFW4 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC17.06■□□□□ 0.32
Trim65Q8BFW4 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim65Q8BFW4 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim65Q8BFW4 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim65Q8BFW4 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim65Q8BFW4 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim65Q8BFW4 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim65Q8BFW4 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim65Q8BFW4 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim65Q8BFW4 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Trim65Q8BFW4 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim65Q8BFW4 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC17.05■□□□□ 0.32
Trim65Q8BFW4 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms