Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim50Q810I2 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim50Q810I2 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
Trim50Q810I2 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim50Q810I2 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim50Q810I2 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim50Q810I2 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim50Q810I2 Gm13312-201ENSMUST00000119631 718 ntBASIC15.54■□□□□ 0.08
Trim50Q810I2 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim50Q810I2 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim50Q810I2 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim50Q810I2 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.54■□□□□ 0.08
Trim50Q810I2 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trim50Q810I2 Gm21362-201ENSMUST00000194272 928 ntBASIC15.54■□□□□ 0.08
Trim50Q810I2 Otx2os1-206ENSMUST00000228153 787 ntBASIC15.54■□□□□ 0.08
Trim50Q810I2 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim50Q810I2 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim50Q810I2 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim50Q810I2 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Trim50Q810I2 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
Trim50Q810I2 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.54■□□□□ 0.08
Trim50Q810I2 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim50Q810I2 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim50Q810I2 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim50Q810I2 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim50Q810I2 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.54■□□□□ 0.08
Trim50Q810I2 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim50Q810I2 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim50Q810I2 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim50Q810I2 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim50Q810I2 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim50Q810I2 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim50Q810I2 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.53■□□□□ 0.08
Trim50Q810I2 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trim50Q810I2 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim50Q810I2 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim50Q810I2 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.53■□□□□ 0.08
Trim50Q810I2 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Trim50Q810I2 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim50Q810I2 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim50Q810I2 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Trim50Q810I2 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC15.53■□□□□ 0.08
Trim50Q810I2 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15.53■□□□□ 0.08
Trim50Q810I2 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim50Q810I2 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC15.53■□□□□ 0.08
Trim50Q810I2 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim50Q810I2 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Trim50Q810I2 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trim50Q810I2 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trim50Q810I2 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim50Q810I2 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim50Q810I2 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim50Q810I2 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim50Q810I2 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Trim50Q810I2 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim50Q810I2 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trim50Q810I2 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim50Q810I2 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim50Q810I2 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trim50Q810I2 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim50Q810I2 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim50Q810I2 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim50Q810I2 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim50Q810I2 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim50Q810I2 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC15.52■□□□□ 0.08
Trim50Q810I2 Gm14859-201ENSMUST00000117752 357 ntBASIC15.52■□□□□ 0.08
Trim50Q810I2 AC153794.1-201ENSMUST00000169148 126 ntBASIC15.52■□□□□ 0.08
Trim50Q810I2 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC15.52■□□□□ 0.08
Trim50Q810I2 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim50Q810I2 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim50Q810I2 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim50Q810I2 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim50Q810I2 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim50Q810I2 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim50Q810I2 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim50Q810I2 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim50Q810I2 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Trim50Q810I2 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.07
Trim50Q810I2 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Trim50Q810I2 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim50Q810I2 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Trim50Q810I2 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim50Q810I2 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim50Q810I2 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.51■□□□□ 0.07
Trim50Q810I2 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim50Q810I2 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim50Q810I2 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim50Q810I2 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim50Q810I2 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim50Q810I2 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim50Q810I2 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim50Q810I2 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim50Q810I2 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim50Q810I2 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Trim50Q810I2 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Trim50Q810I2 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trim50Q810I2 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.51■□□□□ 0.07
Trim50Q810I2 Gm7367-201ENSMUST00000057611 492 ntBASIC15.51■□□□□ 0.07
Trim50Q810I2 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim50Q810I2 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms