Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Ush1gQ80T11 Gm37500-201ENSMUST00000192059 1443 ntBASIC17.4■□□□□ 0.38
Ush1gQ80T11 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Ush1gQ80T11 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ush1gQ80T11 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.4■□□□□ 0.38
Ush1gQ80T11 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ush1gQ80T11 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC17.4■□□□□ 0.38
Ush1gQ80T11 Gm8097-201ENSMUST00000117903 829 ntBASIC17.4■□□□□ 0.38
Ush1gQ80T11 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC17.4■□□□□ 0.38
Ush1gQ80T11 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ush1gQ80T11 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Ush1gQ80T11 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ush1gQ80T11 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC17.4■□□□□ 0.38
Ush1gQ80T11 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ush1gQ80T11 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ush1gQ80T11 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ush1gQ80T11 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ush1gQ80T11 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ush1gQ80T11 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Ush1gQ80T11 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
Ush1gQ80T11 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
Ush1gQ80T11 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ush1gQ80T11 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ush1gQ80T11 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ush1gQ80T11 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Ush1gQ80T11 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ush1gQ80T11 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ush1gQ80T11 Gm7222-201ENSMUST00000117512 906 ntBASIC17.39■□□□□ 0.37
Ush1gQ80T11 Gm14494-201ENSMUST00000118786 435 ntBASIC17.39■□□□□ 0.37
Ush1gQ80T11 Gm9727-201ENSMUST00000161387 555 ntBASIC17.39■□□□□ 0.37
Ush1gQ80T11 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
Ush1gQ80T11 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC17.39■□□□□ 0.37
Ush1gQ80T11 Gm9172-201ENSMUST00000212092 954 ntBASIC17.39■□□□□ 0.37
Ush1gQ80T11 Gm8655-201ENSMUST00000221159 852 ntBASIC17.39■□□□□ 0.37
Ush1gQ80T11 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ush1gQ80T11 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ush1gQ80T11 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC17.39■□□□□ 0.37
Ush1gQ80T11 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ush1gQ80T11 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ush1gQ80T11 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Ush1gQ80T11 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Ush1gQ80T11 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ush1gQ80T11 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ush1gQ80T11 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.39■□□□□ 0.37
Ush1gQ80T11 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Ush1gQ80T11 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ush1gQ80T11 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ush1gQ80T11 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC17.38■□□□□ 0.37
Ush1gQ80T11 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Ush1gQ80T11 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ush1gQ80T11 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ush1gQ80T11 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ush1gQ80T11 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ush1gQ80T11 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ush1gQ80T11 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ush1gQ80T11 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ush1gQ80T11 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ush1gQ80T11 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Ush1gQ80T11 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Ush1gQ80T11 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ush1gQ80T11 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ush1gQ80T11 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ush1gQ80T11 Gm4459-201ENSMUST00000118750 468 ntBASIC17.38■□□□□ 0.37
Ush1gQ80T11 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC17.38■□□□□ 0.37
Ush1gQ80T11 Gm6184-201ENSMUST00000120403 1261 ntBASIC17.38■□□□□ 0.37
Ush1gQ80T11 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC17.38■□□□□ 0.37
Ush1gQ80T11 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC17.38■□□□□ 0.37
Ush1gQ80T11 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ush1gQ80T11 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Ush1gQ80T11 AC225888.1-201ENSMUST00000227184 728 ntBASIC17.38■□□□□ 0.37
Ush1gQ80T11 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ush1gQ80T11 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ush1gQ80T11 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ush1gQ80T11 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ush1gQ80T11 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Ush1gQ80T11 Gm5837-201ENSMUST00000191844 1369 ntBASIC17.38■□□□□ 0.37
Ush1gQ80T11 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.38■□□□□ 0.37
Ush1gQ80T11 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.38■□□□□ 0.37
Ush1gQ80T11 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ush1gQ80T11 Gm6858-201ENSMUST00000208582 1468 ntBASIC17.37■□□□□ 0.37
Ush1gQ80T11 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ush1gQ80T11 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ush1gQ80T11 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ush1gQ80T11 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ush1gQ80T11 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ush1gQ80T11 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ush1gQ80T11 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ush1gQ80T11 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ush1gQ80T11 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Ush1gQ80T11 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ush1gQ80T11 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
Ush1gQ80T11 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ush1gQ80T11 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC17.37■□□□□ 0.37
Ush1gQ80T11 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ush1gQ80T11 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ush1gQ80T11 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ush1gQ80T11 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ush1gQ80T11 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.37■□□□□ 0.37
Ush1gQ80T11 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ush1gQ80T11 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms