Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Gm7712-202ENSMUST00000222331 1510 ntBASIC15.35■□□□□ 0.05
Rfx4Q7TNK1 Gm15378-201ENSMUST00000121894 207 ntBASIC15.35■□□□□ 0.05
Rfx4Q7TNK1 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.35■□□□□ 0.05
Rfx4Q7TNK1 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC15.35■□□□□ 0.05
Rfx4Q7TNK1 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rfx4Q7TNK1 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rfx4Q7TNK1 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rfx4Q7TNK1 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rfx4Q7TNK1 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC15.35■□□□□ 0.05
Rfx4Q7TNK1 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rfx4Q7TNK1 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.35■□□□□ 0.05
Rfx4Q7TNK1 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rfx4Q7TNK1 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rfx4Q7TNK1 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.34■□□□□ 0.05
Rfx4Q7TNK1 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rfx4Q7TNK1 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rfx4Q7TNK1 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rfx4Q7TNK1 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rfx4Q7TNK1 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rfx4Q7TNK1 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Rfx4Q7TNK1 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rfx4Q7TNK1 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rfx4Q7TNK1 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rfx4Q7TNK1 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rfx4Q7TNK1 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rfx4Q7TNK1 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rfx4Q7TNK1 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rfx4Q7TNK1 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rfx4Q7TNK1 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rfx4Q7TNK1 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rfx4Q7TNK1 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC15.34■□□□□ 0.05
Rfx4Q7TNK1 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rfx4Q7TNK1 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rfx4Q7TNK1 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rfx4Q7TNK1 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rfx4Q7TNK1 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rfx4Q7TNK1 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rfx4Q7TNK1 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Rfx4Q7TNK1 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rfx4Q7TNK1 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rfx4Q7TNK1 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rfx4Q7TNK1 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rfx4Q7TNK1 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rfx4Q7TNK1 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rfx4Q7TNK1 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rfx4Q7TNK1 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Rfx4Q7TNK1 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Rfx4Q7TNK1 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rfx4Q7TNK1 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rfx4Q7TNK1 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rfx4Q7TNK1 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
Rfx4Q7TNK1 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC15.33■□□□□ 0.04
Rfx4Q7TNK1 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC15.33■□□□□ 0.04
Rfx4Q7TNK1 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rfx4Q7TNK1 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rfx4Q7TNK1 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rfx4Q7TNK1 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Rfx4Q7TNK1 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rfx4Q7TNK1 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rfx4Q7TNK1 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rfx4Q7TNK1 Phf7-203ENSMUST00000226565 1971 ntBASIC15.33■□□□□ 0.04
Rfx4Q7TNK1 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rfx4Q7TNK1 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rfx4Q7TNK1 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Rfx4Q7TNK1 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rfx4Q7TNK1 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rfx4Q7TNK1 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rfx4Q7TNK1 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC15.32■□□□□ 0.04
Rfx4Q7TNK1 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rfx4Q7TNK1 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Rfx4Q7TNK1 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC15.32■□□□□ 0.04
Rfx4Q7TNK1 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC15.32■□□□□ 0.04
Rfx4Q7TNK1 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rfx4Q7TNK1 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Rfx4Q7TNK1 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Rfx4Q7TNK1 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rfx4Q7TNK1 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Rfx4Q7TNK1 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rfx4Q7TNK1 Sybu-209ENSMUST00000228639 4113 ntBASIC15.32■□□□□ 0.04
Rfx4Q7TNK1 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rfx4Q7TNK1 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rfx4Q7TNK1 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rfx4Q7TNK1 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Rfx4Q7TNK1 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rfx4Q7TNK1 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rfx4Q7TNK1 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rfx4Q7TNK1 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rfx4Q7TNK1 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rfx4Q7TNK1 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rfx4Q7TNK1 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Rfx4Q7TNK1 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rfx4Q7TNK1 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Rfx4Q7TNK1 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rfx4Q7TNK1 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rfx4Q7TNK1 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC15.31■□□□□ 0.04
Rfx4Q7TNK1 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rfx4Q7TNK1 Gm44450-201ENSMUST00000199528 114 ntBASIC15.31■□□□□ 0.04
Rfx4Q7TNK1 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rfx4Q7TNK1 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rfx4Q7TNK1 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms