Protein–RNA interactions for Protein: Q6PE54

Dhx40, Probable ATP-dependent RNA helicase DHX40, mousemouse

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dhx40Q6PE54 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Dhx40Q6PE54 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Dhx40Q6PE54 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Dhx40Q6PE54 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Dhx40Q6PE54 Gm43598-201ENSMUST00000202482 2479 ntBASIC17.74■□□□□ 0.43
Dhx40Q6PE54 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Dhx40Q6PE54 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Dhx40Q6PE54 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Dhx40Q6PE54 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Dhx40Q6PE54 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Dhx40Q6PE54 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Dhx40Q6PE54 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Dhx40Q6PE54 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC17.73■□□□□ 0.43
Dhx40Q6PE54 Gm6433-201ENSMUST00000118634 875 ntBASIC17.73■□□□□ 0.43
Dhx40Q6PE54 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Dhx40Q6PE54 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.73■□□□□ 0.43
Dhx40Q6PE54 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Dhx40Q6PE54 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC17.73■□□□□ 0.43
Dhx40Q6PE54 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Dhx40Q6PE54 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Dhx40Q6PE54 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Dhx40Q6PE54 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Dhx40Q6PE54 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Dhx40Q6PE54 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Dhx40Q6PE54 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Dhx40Q6PE54 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Dhx40Q6PE54 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Dhx40Q6PE54 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Dhx40Q6PE54 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.72■□□□□ 0.43
Dhx40Q6PE54 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Dhx40Q6PE54 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Dhx40Q6PE54 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Dhx40Q6PE54 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Dhx40Q6PE54 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Dhx40Q6PE54 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Dhx40Q6PE54 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Dhx40Q6PE54 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC17.72■□□□□ 0.43
Dhx40Q6PE54 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Dhx40Q6PE54 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Dhx40Q6PE54 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Dhx40Q6PE54 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Dhx40Q6PE54 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Dhx40Q6PE54 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Dhx40Q6PE54 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Dhx40Q6PE54 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Dhx40Q6PE54 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Dhx40Q6PE54 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Dhx40Q6PE54 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Dhx40Q6PE54 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC17.72■□□□□ 0.43
Dhx40Q6PE54 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Dhx40Q6PE54 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Dhx40Q6PE54 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC17.72■□□□□ 0.43
Dhx40Q6PE54 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Dhx40Q6PE54 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Dhx40Q6PE54 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Dhx40Q6PE54 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Dhx40Q6PE54 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Dhx40Q6PE54 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Dhx40Q6PE54 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Dhx40Q6PE54 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Dhx40Q6PE54 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Dhx40Q6PE54 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Dhx40Q6PE54 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Dhx40Q6PE54 Gm13559-201ENSMUST00000120476 863 ntBASIC17.71■□□□□ 0.43
Dhx40Q6PE54 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Dhx40Q6PE54 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Dhx40Q6PE54 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.71■□□□□ 0.43
Dhx40Q6PE54 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Dhx40Q6PE54 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Dhx40Q6PE54 Wnt10b-206ENSMUST00000228546 2709 ntBASIC17.71■□□□□ 0.43
Dhx40Q6PE54 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
Dhx40Q6PE54 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Dhx40Q6PE54 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Dhx40Q6PE54 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Dhx40Q6PE54 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Dhx40Q6PE54 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Dhx40Q6PE54 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC17.71■□□□□ 0.43
Dhx40Q6PE54 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Dhx40Q6PE54 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Dhx40Q6PE54 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Dhx40Q6PE54 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Dhx40Q6PE54 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Dhx40Q6PE54 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Dhx40Q6PE54 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Dhx40Q6PE54 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Dhx40Q6PE54 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Dhx40Q6PE54 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Dhx40Q6PE54 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Dhx40Q6PE54 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.7■□□□□ 0.42
Dhx40Q6PE54 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC17.7■□□□□ 0.42
Dhx40Q6PE54 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Dhx40Q6PE54 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Dhx40Q6PE54 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Dhx40Q6PE54 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Dhx40Q6PE54 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.7■□□□□ 0.42
Dhx40Q6PE54 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Dhx40Q6PE54 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Dhx40Q6PE54 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Dhx40Q6PE54 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Dhx40Q6PE54 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms