Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hmgb4Q6P8W9 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Hmgb4Q6P8W9 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hmgb4Q6P8W9 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hmgb4Q6P8W9 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC16.68■□□□□ 0.26
Hmgb4Q6P8W9 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC16.68■□□□□ 0.26
Hmgb4Q6P8W9 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.68■□□□□ 0.26
Hmgb4Q6P8W9 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hmgb4Q6P8W9 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hmgb4Q6P8W9 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hmgb4Q6P8W9 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hmgb4Q6P8W9 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.68■□□□□ 0.26
Hmgb4Q6P8W9 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Hmgb4Q6P8W9 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Hmgb4Q6P8W9 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hmgb4Q6P8W9 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Hmgb4Q6P8W9 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hmgb4Q6P8W9 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hmgb4Q6P8W9 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hmgb4Q6P8W9 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hmgb4Q6P8W9 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Hmgb4Q6P8W9 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hmgb4Q6P8W9 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hmgb4Q6P8W9 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Hmgb4Q6P8W9 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hmgb4Q6P8W9 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hmgb4Q6P8W9 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hmgb4Q6P8W9 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Hmgb4Q6P8W9 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hmgb4Q6P8W9 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Hmgb4Q6P8W9 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Hmgb4Q6P8W9 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC16.67■□□□□ 0.26
Hmgb4Q6P8W9 Gm27525-201ENSMUST00000184465 107 ntBASIC16.67■□□□□ 0.26
Hmgb4Q6P8W9 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC16.67■□□□□ 0.26
Hmgb4Q6P8W9 Gm7506-201ENSMUST00000207758 815 ntBASIC16.67■□□□□ 0.26
Hmgb4Q6P8W9 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC16.67■□□□□ 0.26
Hmgb4Q6P8W9 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hmgb4Q6P8W9 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hmgb4Q6P8W9 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
Hmgb4Q6P8W9 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hmgb4Q6P8W9 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hmgb4Q6P8W9 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hmgb4Q6P8W9 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hmgb4Q6P8W9 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Hmgb4Q6P8W9 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hmgb4Q6P8W9 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hmgb4Q6P8W9 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hmgb4Q6P8W9 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hmgb4Q6P8W9 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hmgb4Q6P8W9 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hmgb4Q6P8W9 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Hmgb4Q6P8W9 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hmgb4Q6P8W9 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hmgb4Q6P8W9 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
Hmgb4Q6P8W9 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Hmgb4Q6P8W9 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hmgb4Q6P8W9 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hmgb4Q6P8W9 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hmgb4Q6P8W9 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hmgb4Q6P8W9 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hmgb4Q6P8W9 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Hmgb4Q6P8W9 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hmgb4Q6P8W9 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Hmgb4Q6P8W9 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hmgb4Q6P8W9 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hmgb4Q6P8W9 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Hmgb4Q6P8W9 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.66■□□□□ 0.26
Hmgb4Q6P8W9 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hmgb4Q6P8W9 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hmgb4Q6P8W9 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hmgb4Q6P8W9 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hmgb4Q6P8W9 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Hmgb4Q6P8W9 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hmgb4Q6P8W9 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hmgb4Q6P8W9 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Hmgb4Q6P8W9 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hmgb4Q6P8W9 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hmgb4Q6P8W9 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Hmgb4Q6P8W9 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hmgb4Q6P8W9 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Hmgb4Q6P8W9 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hmgb4Q6P8W9 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.65■□□□□ 0.26
Hmgb4Q6P8W9 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hmgb4Q6P8W9 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hmgb4Q6P8W9 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC16.65■□□□□ 0.26
Hmgb4Q6P8W9 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Hmgb4Q6P8W9 Gm10060-201ENSMUST00000212002 111 ntBASIC16.65■□□□□ 0.26
Hmgb4Q6P8W9 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hmgb4Q6P8W9 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.65■□□□□ 0.26
Hmgb4Q6P8W9 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.65■□□□□ 0.26
Hmgb4Q6P8W9 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Hmgb4Q6P8W9 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Hmgb4Q6P8W9 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hmgb4Q6P8W9 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hmgb4Q6P8W9 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hmgb4Q6P8W9 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Hmgb4Q6P8W9 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hmgb4Q6P8W9 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hmgb4Q6P8W9 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Hmgb4Q6P8W9 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms