Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ctr9Q62018 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ctr9Q62018 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Ctr9Q62018 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ctr9Q62018 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ctr9Q62018 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Ctr9Q62018 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ctr9Q62018 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ctr9Q62018 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Ctr9Q62018 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Ctr9Q62018 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ctr9Q62018 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ctr9Q62018 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ctr9Q62018 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ctr9Q62018 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ctr9Q62018 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ctr9Q62018 Gm25990-201ENSMUST00000102440 86 ntBASIC18.73■□□□□ 0.59
Ctr9Q62018 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ctr9Q62018 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Ctr9Q62018 Gm9449-201ENSMUST00000207265 1011 ntBASIC18.73■□□□□ 0.59
Ctr9Q62018 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC18.73■□□□□ 0.59
Ctr9Q62018 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ctr9Q62018 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Ctr9Q62018 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ctr9Q62018 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC18.73■□□□□ 0.59
Ctr9Q62018 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ctr9Q62018 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ctr9Q62018 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ctr9Q62018 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ctr9Q62018 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ctr9Q62018 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ctr9Q62018 Gm5837-201ENSMUST00000191844 1369 ntBASIC18.72■□□□□ 0.59
Ctr9Q62018 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ctr9Q62018 Gm4609-201ENSMUST00000106443 1002 ntBASIC18.72■□□□□ 0.59
Ctr9Q62018 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ctr9Q62018 Gm5138-201ENSMUST00000113842 1002 ntBASIC18.72■□□□□ 0.59
Ctr9Q62018 Gm15191-201ENSMUST00000117933 1000 ntBASIC18.72■□□□□ 0.59
Ctr9Q62018 Gm12182-201ENSMUST00000118655 1008 ntBASIC18.72■□□□□ 0.59
Ctr9Q62018 Gm13882-201ENSMUST00000120886 1002 ntBASIC18.72■□□□□ 0.59
Ctr9Q62018 Gm10284-201ENSMUST00000145057 1005 ntBASIC18.72■□□□□ 0.59
Ctr9Q62018 Gm10481-201ENSMUST00000179228 1002 ntBASIC18.72■□□□□ 0.59
Ctr9Q62018 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC18.72■□□□□ 0.59
Ctr9Q62018 Gm2574-201ENSMUST00000181051 1002 ntBASIC18.72■□□□□ 0.59
Ctr9Q62018 Gm3200-201ENSMUST00000181493 1002 ntBASIC18.72■□□□□ 0.59
Ctr9Q62018 Gm8825-201ENSMUST00000182565 998 ntBASIC18.72■□□□□ 0.59
Ctr9Q62018 Gm4518-201ENSMUST00000182638 718 ntBASIC18.72■□□□□ 0.59
Ctr9Q62018 Gm8330-201ENSMUST00000182754 1008 ntBASIC18.72■□□□□ 0.59
Ctr9Q62018 Gm4575-201ENSMUST00000182991 1002 ntBASIC18.72■□□□□ 0.59
Ctr9Q62018 Gm8709-201ENSMUST00000183230 1012 ntBASIC18.72■□□□□ 0.59
Ctr9Q62018 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ctr9Q62018 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC18.72■□□□□ 0.59
Ctr9Q62018 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ctr9Q62018 Gm10293-201ENSMUST00000076317 1002 ntBASIC18.72■□□□□ 0.59
Ctr9Q62018 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Ctr9Q62018 Gm6316-201ENSMUST00000082064 1020 ntBASIC18.72■□□□□ 0.59
Ctr9Q62018 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ctr9Q62018 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ctr9Q62018 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ctr9Q62018 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC18.72■□□□□ 0.59
Ctr9Q62018 Gm14026-201ENSMUST00000120625 1789 ntBASIC18.72■□□□□ 0.59
Ctr9Q62018 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ctr9Q62018 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ctr9Q62018 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ctr9Q62018 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC18.72■□□□□ 0.59
Ctr9Q62018 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ctr9Q62018 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ctr9Q62018 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ctr9Q62018 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ctr9Q62018 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ctr9Q62018 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ctr9Q62018 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ctr9Q62018 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Ctr9Q62018 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ctr9Q62018 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC18.71■□□□□ 0.59
Ctr9Q62018 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ctr9Q62018 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ctr9Q62018 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ctr9Q62018 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC18.71■□□□□ 0.59
Ctr9Q62018 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ctr9Q62018 Gm10060-201ENSMUST00000212002 111 ntBASIC18.71■□□□□ 0.59
Ctr9Q62018 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ctr9Q62018 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ctr9Q62018 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Ctr9Q62018 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ctr9Q62018 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ctr9Q62018 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ctr9Q62018 Gm8784-201ENSMUST00000222096 1435 ntBASIC18.71■□□□□ 0.59
Ctr9Q62018 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ctr9Q62018 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ctr9Q62018 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ctr9Q62018 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
Ctr9Q62018 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ctr9Q62018 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Ctr9Q62018 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ctr9Q62018 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ctr9Q62018 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ctr9Q62018 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.58
Ctr9Q62018 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
Ctr9Q62018 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Ctr9Q62018 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms