Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.15■□□□□ 0.66
Mre11Q61216 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Mre11Q61216 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Mre11Q61216 Gm10602-201ENSMUST00000098239 609 ntBASIC19.15■□□□□ 0.66
Mre11Q61216 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Mre11Q61216 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Mre11Q61216 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC19.15■□□□□ 0.66
Mre11Q61216 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Mre11Q61216 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Mre11Q61216 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.66
Mre11Q61216 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Mre11Q61216 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Mre11Q61216 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
Mre11Q61216 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC19.14■□□□□ 0.65
Mre11Q61216 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC19.14■□□□□ 0.65
Mre11Q61216 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Mre11Q61216 Gm6190-201ENSMUST00000220683 1374 ntBASIC19.14■□□□□ 0.65
Mre11Q61216 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Mre11Q61216 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Mre11Q61216 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Mre11Q61216 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Mre11Q61216 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Mre11Q61216 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Mre11Q61216 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Mre11Q61216 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Mre11Q61216 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Mre11Q61216 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Mre11Q61216 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mre11Q61216 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Mre11Q61216 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mre11Q61216 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mre11Q61216 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Mre11Q61216 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC19.13■□□□□ 0.65
Mre11Q61216 Gm18958-201ENSMUST00000174258 762 ntBASIC19.13■□□□□ 0.65
Mre11Q61216 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mre11Q61216 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mre11Q61216 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mre11Q61216 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mre11Q61216 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mre11Q61216 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Mre11Q61216 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Mre11Q61216 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mre11Q61216 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mre11Q61216 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mre11Q61216 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mre11Q61216 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mre11Q61216 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mre11Q61216 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mre11Q61216 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC19.13■□□□□ 0.65
Mre11Q61216 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC19.12■□□□□ 0.65
Mre11Q61216 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Mre11Q61216 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Mre11Q61216 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Mre11Q61216 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Mre11Q61216 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.12■□□□□ 0.65
Mre11Q61216 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC19.12■□□□□ 0.65
Mre11Q61216 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Mre11Q61216 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Mre11Q61216 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Mre11Q61216 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Mre11Q61216 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Mre11Q61216 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Mre11Q61216 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Mre11Q61216 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Mre11Q61216 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Mre11Q61216 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC19.11■□□□□ 0.65
Mre11Q61216 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Mre11Q61216 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Mre11Q61216 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Mre11Q61216 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Mre11Q61216 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Mre11Q61216 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Mre11Q61216 Gm12933-201ENSMUST00000120203 872 ntBASIC19.11■□□□□ 0.65
Mre11Q61216 Mir5133-201ENSMUST00000174955 77 ntBASIC19.11■□□□□ 0.65
Mre11Q61216 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Mre11Q61216 Gm36967-201ENSMUST00000193814 266 ntBASIC19.11■□□□□ 0.65
Mre11Q61216 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Mre11Q61216 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Mre11Q61216 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Mre11Q61216 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Mre11Q61216 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Mre11Q61216 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Mre11Q61216 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Mre11Q61216 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC19.11■□□□□ 0.65
Mre11Q61216 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Mre11Q61216 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Mre11Q61216 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC19.11■□□□□ 0.65
Mre11Q61216 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Mre11Q61216 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Mre11Q61216 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Mre11Q61216 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Mre11Q61216 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Mre11Q61216 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Mre11Q61216 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Mre11Q61216 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Mre11Q61216 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Mre11Q61216 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Mre11Q61216 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Mre11Q61216 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Mre11Q61216 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 90.3 ms