Protein–RNA interactions for Protein: Q61191

Hcfc1, Host cell factor 1, mousemouse

Known RBP Predictions only

Length 2,045 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1Q61191 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hcfc1Q61191 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hcfc1Q61191 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC13.3□□□□□ -0.28
Hcfc1Q61191 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Hcfc1Q61191 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hcfc1Q61191 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Hcfc1Q61191 Gm20553-201ENSMUST00000204205 844 ntBASIC13.29□□□□□ -0.28
Hcfc1Q61191 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hcfc1Q61191 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Hcfc1Q61191 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Hcfc1Q61191 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hcfc1Q61191 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hcfc1Q61191 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hcfc1Q61191 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hcfc1Q61191 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Hcfc1Q61191 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Hcfc1Q61191 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hcfc1Q61191 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Hcfc1Q61191 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.29□□□□□ -0.28
Hcfc1Q61191 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC13.29□□□□□ -0.28
Hcfc1Q61191 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Hcfc1Q61191 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hcfc1Q61191 Gm12428-201ENSMUST00000119844 727 ntBASIC13.29□□□□□ -0.28
Hcfc1Q61191 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.29□□□□□ -0.28
Hcfc1Q61191 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.29□□□□□ -0.28
Hcfc1Q61191 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hcfc1Q61191 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hcfc1Q61191 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hcfc1Q61191 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
Hcfc1Q61191 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Hcfc1Q61191 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hcfc1Q61191 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.28□□□□□ -0.28
Hcfc1Q61191 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC13.28□□□□□ -0.28
Hcfc1Q61191 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hcfc1Q61191 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hcfc1Q61191 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hcfc1Q61191 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Hcfc1Q61191 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hcfc1Q61191 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Hcfc1Q61191 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Hcfc1Q61191 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Hcfc1Q61191 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Hcfc1Q61191 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Hcfc1Q61191 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Hcfc1Q61191 Gm5626-201ENSMUST00000222151 1058 ntBASIC13.28□□□□□ -0.28
Hcfc1Q61191 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hcfc1Q61191 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hcfc1Q61191 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Hcfc1Q61191 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Hcfc1Q61191 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hcfc1Q61191 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hcfc1Q61191 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hcfc1Q61191 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hcfc1Q61191 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hcfc1Q61191 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Hcfc1Q61191 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Hcfc1Q61191 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hcfc1Q61191 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hcfc1Q61191 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Hcfc1Q61191 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC13.27□□□□□ -0.28
Hcfc1Q61191 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Hcfc1Q61191 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hcfc1Q61191 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hcfc1Q61191 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hcfc1Q61191 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hcfc1Q61191 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Hcfc1Q61191 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hcfc1Q61191 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hcfc1Q61191 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hcfc1Q61191 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hcfc1Q61191 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Hcfc1Q61191 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hcfc1Q61191 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hcfc1Q61191 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hcfc1Q61191 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Hcfc1Q61191 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC13.27□□□□□ -0.29
Hcfc1Q61191 Gm6226-201ENSMUST00000117765 1146 ntBASIC13.27□□□□□ -0.29
Hcfc1Q61191 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC13.27□□□□□ -0.29
Hcfc1Q61191 Gm5186-201ENSMUST00000218781 920 ntBASIC13.27□□□□□ -0.29
Hcfc1Q61191 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hcfc1Q61191 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hcfc1Q61191 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Hcfc1Q61191 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hcfc1Q61191 Gm8839-201ENSMUST00000121279 1645 ntBASIC13.26□□□□□ -0.29
Hcfc1Q61191 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hcfc1Q61191 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hcfc1Q61191 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hcfc1Q61191 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Hcfc1Q61191 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hcfc1Q61191 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
Hcfc1Q61191 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Hcfc1Q61191 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hcfc1Q61191 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hcfc1Q61191 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Hcfc1Q61191 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Hcfc1Q61191 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hcfc1Q61191 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hcfc1Q61191 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hcfc1Q61191 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC13.26□□□□□ -0.29
Hcfc1Q61191 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms