Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Vps54Q5SPW0 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC19.11■□□□□ 0.65
Vps54Q5SPW0 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Vps54Q5SPW0 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC19.11■□□□□ 0.65
Vps54Q5SPW0 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Vps54Q5SPW0 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Vps54Q5SPW0 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Vps54Q5SPW0 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Vps54Q5SPW0 Gm37584-201ENSMUST00000193595 1290 ntBASIC19.11■□□□□ 0.65
Vps54Q5SPW0 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
Vps54Q5SPW0 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC19.11■□□□□ 0.65
Vps54Q5SPW0 Gm18622-201ENSMUST00000219361 595 ntBASIC19.11■□□□□ 0.65
Vps54Q5SPW0 AC117588.1-201ENSMUST00000228510 999 ntBASIC19.11■□□□□ 0.65
Vps54Q5SPW0 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Vps54Q5SPW0 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Vps54Q5SPW0 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Vps54Q5SPW0 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC19.11■□□□□ 0.65
Vps54Q5SPW0 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Vps54Q5SPW0 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Vps54Q5SPW0 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Vps54Q5SPW0 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Vps54Q5SPW0 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Vps54Q5SPW0 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Vps54Q5SPW0 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Vps54Q5SPW0 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Vps54Q5SPW0 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Vps54Q5SPW0 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Vps54Q5SPW0 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
Vps54Q5SPW0 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Vps54Q5SPW0 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Vps54Q5SPW0 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
Vps54Q5SPW0 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC19.1■□□□□ 0.65
Vps54Q5SPW0 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC19.1■□□□□ 0.65
Vps54Q5SPW0 Gm4535-201ENSMUST00000182274 558 ntBASIC19.1■□□□□ 0.65
Vps54Q5SPW0 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Vps54Q5SPW0 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC19.1■□□□□ 0.65
Vps54Q5SPW0 Gm8655-201ENSMUST00000221159 852 ntBASIC19.1■□□□□ 0.65
Vps54Q5SPW0 Mzt1-203ENSMUST00000227948 952 ntBASIC19.1■□□□□ 0.65
Vps54Q5SPW0 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Vps54Q5SPW0 Gm10355-201ENSMUST00000097146 517 ntBASIC19.1■□□□□ 0.65
Vps54Q5SPW0 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Vps54Q5SPW0 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Vps54Q5SPW0 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Vps54Q5SPW0 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Vps54Q5SPW0 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Vps54Q5SPW0 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Vps54Q5SPW0 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Vps54Q5SPW0 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Vps54Q5SPW0 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Vps54Q5SPW0 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Vps54Q5SPW0 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Vps54Q5SPW0 Ntrk2-205ENSMUST00000224402 2284 ntBASIC19.09■□□□□ 0.65
Vps54Q5SPW0 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
Vps54Q5SPW0 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Vps54Q5SPW0 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Vps54Q5SPW0 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Vps54Q5SPW0 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
Vps54Q5SPW0 Gm7862-201ENSMUST00000121461 292 ntBASIC19.09■□□□□ 0.65
Vps54Q5SPW0 Gm11780-201ENSMUST00000136880 516 ntBASIC19.09■□□□□ 0.65
Vps54Q5SPW0 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC19.09■□□□□ 0.65
Vps54Q5SPW0 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Vps54Q5SPW0 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC19.09■□□□□ 0.65
Vps54Q5SPW0 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC19.09■□□□□ 0.65
Vps54Q5SPW0 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC19.09■□□□□ 0.65
Vps54Q5SPW0 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Vps54Q5SPW0 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Vps54Q5SPW0 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Vps54Q5SPW0 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Vps54Q5SPW0 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC19.09■□□□□ 0.65
Vps54Q5SPW0 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Vps54Q5SPW0 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Vps54Q5SPW0 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Vps54Q5SPW0 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Vps54Q5SPW0 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Vps54Q5SPW0 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Vps54Q5SPW0 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Vps54Q5SPW0 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Vps54Q5SPW0 Gm18856-201ENSMUST00000178096 1374 ntBASIC19.08■□□□□ 0.65
Vps54Q5SPW0 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Vps54Q5SPW0 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Vps54Q5SPW0 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Vps54Q5SPW0 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Vps54Q5SPW0 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Vps54Q5SPW0 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC19.08■□□□□ 0.64
Vps54Q5SPW0 AC161829.1-201ENSMUST00000220298 281 ntBASIC19.08■□□□□ 0.64
Vps54Q5SPW0 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Vps54Q5SPW0 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Vps54Q5SPW0 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Vps54Q5SPW0 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC19.08■□□□□ 0.64
Vps54Q5SPW0 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Vps54Q5SPW0 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC19.08■□□□□ 0.64
Vps54Q5SPW0 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Vps54Q5SPW0 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Vps54Q5SPW0 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Vps54Q5SPW0 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Vps54Q5SPW0 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Vps54Q5SPW0 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Vps54Q5SPW0 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Vps54Q5SPW0 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Vps54Q5SPW0 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms