Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7d-4Q5R1H9 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7d-4Q5R1H9 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7d-4Q5R1H9 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7d-4Q5R1H9 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7d-4Q5R1H9 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7d-4Q5R1H9 Gm38058-201ENSMUST00000194323 4368 ntBASIC12.2□□□□□ -0.46
Trav7d-4Q5R1H9 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7d-4Q5R1H9 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7d-4Q5R1H9 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7d-4Q5R1H9 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7d-4Q5R1H9 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7d-4Q5R1H9 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7d-4Q5R1H9 Gm14464-201ENSMUST00000119658 1254 ntBASIC12.2□□□□□ -0.46
Trav7d-4Q5R1H9 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7d-4Q5R1H9 Gm10033-202ENSMUST00000211874 928 ntBASIC12.2□□□□□ -0.46
Trav7d-4Q5R1H9 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC12.2□□□□□ -0.46
Trav7d-4Q5R1H9 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7d-4Q5R1H9 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7d-4Q5R1H9 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav7d-4Q5R1H9 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trav7d-4Q5R1H9 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7d-4Q5R1H9 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7d-4Q5R1H9 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7d-4Q5R1H9 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7d-4Q5R1H9 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Trav7d-4Q5R1H9 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7d-4Q5R1H9 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Trav7d-4Q5R1H9 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7d-4Q5R1H9 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7d-4Q5R1H9 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7d-4Q5R1H9 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7d-4Q5R1H9 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC12.19□□□□□ -0.46
Trav7d-4Q5R1H9 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7d-4Q5R1H9 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7d-4Q5R1H9 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7d-4Q5R1H9 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7d-4Q5R1H9 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7d-4Q5R1H9 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7d-4Q5R1H9 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7d-4Q5R1H9 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7d-4Q5R1H9 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7d-4Q5R1H9 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7d-4Q5R1H9 Gm10517-202ENSMUST00000192970 758 ntBASIC12.19□□□□□ -0.46
Trav7d-4Q5R1H9 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC12.19□□□□□ -0.46
Trav7d-4Q5R1H9 Gm5297-201ENSMUST00000198555 1171 ntBASIC12.19□□□□□ -0.46
Trav7d-4Q5R1H9 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7d-4Q5R1H9 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7d-4Q5R1H9 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7d-4Q5R1H9 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7d-4Q5R1H9 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7d-4Q5R1H9 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav7d-4Q5R1H9 Gfra2-202ENSMUST00000227633 1480 ntBASIC12.19□□□□□ -0.46
Trav7d-4Q5R1H9 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7d-4Q5R1H9 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7d-4Q5R1H9 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7d-4Q5R1H9 Gm9768-201ENSMUST00000206007 2861 ntBASIC12.19□□□□□ -0.46
Trav7d-4Q5R1H9 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7d-4Q5R1H9 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.19□□□□□ -0.46
Trav7d-4Q5R1H9 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav7d-4Q5R1H9 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7d-4Q5R1H9 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7d-4Q5R1H9 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7d-4Q5R1H9 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7d-4Q5R1H9 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trav7d-4Q5R1H9 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7d-4Q5R1H9 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7d-4Q5R1H9 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7d-4Q5R1H9 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7d-4Q5R1H9 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav7d-4Q5R1H9 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7d-4Q5R1H9 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7d-4Q5R1H9 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC12.18□□□□□ -0.46
Trav7d-4Q5R1H9 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trav7d-4Q5R1H9 Alkbh1-212ENSMUST00000185301 408 ntBASIC12.18□□□□□ -0.46
Trav7d-4Q5R1H9 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC12.18□□□□□ -0.46
Trav7d-4Q5R1H9 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC12.18□□□□□ -0.46
Trav7d-4Q5R1H9 Gm18671-201ENSMUST00000214826 683 ntBASIC12.18□□□□□ -0.46
Trav7d-4Q5R1H9 Rab3c-203ENSMUST00000224180 967 ntBASIC12.18□□□□□ -0.46
Trav7d-4Q5R1H9 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7d-4Q5R1H9 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Trav7d-4Q5R1H9 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trav7d-4Q5R1H9 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7d-4Q5R1H9 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7d-4Q5R1H9 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7d-4Q5R1H9 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7d-4Q5R1H9 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav7d-4Q5R1H9 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC12.18□□□□□ -0.46
Trav7d-4Q5R1H9 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7d-4Q5R1H9 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7d-4Q5R1H9 Gm16425-201ENSMUST00000118143 3130 ntBASIC12.17□□□□□ -0.46
Trav7d-4Q5R1H9 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7d-4Q5R1H9 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7d-4Q5R1H9 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav7d-4Q5R1H9 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7d-4Q5R1H9 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7d-4Q5R1H9 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7d-4Q5R1H9 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7d-4Q5R1H9 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7d-4Q5R1H9 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms