Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav8d-1Q5R1H8 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav8d-1Q5R1H8 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav8d-1Q5R1H8 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav8d-1Q5R1H8 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav8d-1Q5R1H8 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav8d-1Q5R1H8 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav8d-1Q5R1H8 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav8d-1Q5R1H8 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav8d-1Q5R1H8 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav8d-1Q5R1H8 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav8d-1Q5R1H8 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav8d-1Q5R1H8 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
Trav8d-1Q5R1H8 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav8d-1Q5R1H8 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav8d-1Q5R1H8 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav8d-1Q5R1H8 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav8d-1Q5R1H8 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trav8d-1Q5R1H8 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav8d-1Q5R1H8 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.1□□□□□ -0.31
Trav8d-1Q5R1H8 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Trav8d-1Q5R1H8 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav8d-1Q5R1H8 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav8d-1Q5R1H8 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav8d-1Q5R1H8 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav8d-1Q5R1H8 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC13.1□□□□□ -0.31
Trav8d-1Q5R1H8 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Trav8d-1Q5R1H8 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav8d-1Q5R1H8 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav8d-1Q5R1H8 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC13.1□□□□□ -0.31
Trav8d-1Q5R1H8 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC13.1□□□□□ -0.31
Trav8d-1Q5R1H8 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav8d-1Q5R1H8 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav8d-1Q5R1H8 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav8d-1Q5R1H8 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav8d-1Q5R1H8 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav8d-1Q5R1H8 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav8d-1Q5R1H8 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav8d-1Q5R1H8 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav8d-1Q5R1H8 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Trav8d-1Q5R1H8 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav8d-1Q5R1H8 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav8d-1Q5R1H8 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav8d-1Q5R1H8 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav8d-1Q5R1H8 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav8d-1Q5R1H8 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trav8d-1Q5R1H8 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav8d-1Q5R1H8 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav8d-1Q5R1H8 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav8d-1Q5R1H8 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trav8d-1Q5R1H8 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav8d-1Q5R1H8 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Trav8d-1Q5R1H8 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav8d-1Q5R1H8 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav8d-1Q5R1H8 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav8d-1Q5R1H8 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trav8d-1Q5R1H8 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Trav8d-1Q5R1H8 Otx2os1-204ENSMUST00000227221 751 ntBASIC13.09□□□□□ -0.31
Trav8d-1Q5R1H8 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav8d-1Q5R1H8 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC13.09□□□□□ -0.31
Trav8d-1Q5R1H8 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav8d-1Q5R1H8 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav8d-1Q5R1H8 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav8d-1Q5R1H8 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav8d-1Q5R1H8 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav8d-1Q5R1H8 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav8d-1Q5R1H8 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav8d-1Q5R1H8 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav8d-1Q5R1H8 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav8d-1Q5R1H8 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav8d-1Q5R1H8 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav8d-1Q5R1H8 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trav8d-1Q5R1H8 Gm42473-201ENSMUST00000201056 2291 ntBASIC13.09□□□□□ -0.31
Trav8d-1Q5R1H8 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav8d-1Q5R1H8 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav8d-1Q5R1H8 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC13.09□□□□□ -0.31
Trav8d-1Q5R1H8 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav8d-1Q5R1H8 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
Trav8d-1Q5R1H8 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav8d-1Q5R1H8 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav8d-1Q5R1H8 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav8d-1Q5R1H8 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav8d-1Q5R1H8 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav8d-1Q5R1H8 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav8d-1Q5R1H8 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav8d-1Q5R1H8 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Trav8d-1Q5R1H8 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav8d-1Q5R1H8 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav8d-1Q5R1H8 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC13.08□□□□□ -0.32
Trav8d-1Q5R1H8 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav8d-1Q5R1H8 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC13.08□□□□□ -0.32
Trav8d-1Q5R1H8 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav8d-1Q5R1H8 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav8d-1Q5R1H8 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav8d-1Q5R1H8 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav8d-1Q5R1H8 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav8d-1Q5R1H8 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Trav8d-1Q5R1H8 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Trav8d-1Q5R1H8 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav8d-1Q5R1H8 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms