Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Gm18101-201ENSMUST00000215769 548 ntBASIC12.81□□□□□ -0.36
Trav6-3Q5R1E6 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC12.81□□□□□ -0.36
Trav6-3Q5R1E6 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Trav6-3Q5R1E6 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-3Q5R1E6 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav6-3Q5R1E6 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-3Q5R1E6 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-3Q5R1E6 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-3Q5R1E6 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-3Q5R1E6 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trav6-3Q5R1E6 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-3Q5R1E6 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-3Q5R1E6 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-3Q5R1E6 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-3Q5R1E6 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trav6-3Q5R1E6 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-3Q5R1E6 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trav6-3Q5R1E6 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-3Q5R1E6 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-3Q5R1E6 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-3Q5R1E6 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-3Q5R1E6 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-3Q5R1E6 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-3Q5R1E6 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-3Q5R1E6 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-3Q5R1E6 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trav6-3Q5R1E6 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Trav6-3Q5R1E6 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-3Q5R1E6 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC12.8□□□□□ -0.36
Trav6-3Q5R1E6 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC12.8□□□□□ -0.36
Trav6-3Q5R1E6 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Trav6-3Q5R1E6 Gm22697-201ENSMUST00000175194 63 ntBASIC12.8□□□□□ -0.36
Trav6-3Q5R1E6 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-3Q5R1E6 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav6-3Q5R1E6 AC112142.1-201ENSMUST00000228796 918 ntBASIC12.8□□□□□ -0.36
Trav6-3Q5R1E6 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-3Q5R1E6 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-3Q5R1E6 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-3Q5R1E6 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trav6-3Q5R1E6 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-3Q5R1E6 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-3Q5R1E6 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav6-3Q5R1E6 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-3Q5R1E6 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-3Q5R1E6 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav6-3Q5R1E6 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-3Q5R1E6 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-3Q5R1E6 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-3Q5R1E6 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-3Q5R1E6 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-3Q5R1E6 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trav6-3Q5R1E6 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-3Q5R1E6 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-3Q5R1E6 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-3Q5R1E6 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Trav6-3Q5R1E6 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC12.79□□□□□ -0.36
Trav6-3Q5R1E6 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-3Q5R1E6 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-3Q5R1E6 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trav6-3Q5R1E6 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-3Q5R1E6 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-3Q5R1E6 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-3Q5R1E6 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-3Q5R1E6 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-3Q5R1E6 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-3Q5R1E6 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-3Q5R1E6 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-3Q5R1E6 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-3Q5R1E6 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav6-3Q5R1E6 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trav6-3Q5R1E6 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-3Q5R1E6 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC12.78□□□□□ -0.36
Trav6-3Q5R1E6 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-3Q5R1E6 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-3Q5R1E6 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-3Q5R1E6 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-3Q5R1E6 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-3Q5R1E6 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC12.78□□□□□ -0.36
Trav6-3Q5R1E6 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav6-3Q5R1E6 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-3Q5R1E6 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC12.78□□□□□ -0.36
Trav6-3Q5R1E6 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-3Q5R1E6 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-3Q5R1E6 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC12.78□□□□□ -0.36
Trav6-3Q5R1E6 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-3Q5R1E6 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trav6-3Q5R1E6 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
Trav6-3Q5R1E6 CT009713.7-201ENSMUST00000224689 571 ntBASIC12.78□□□□□ -0.36
Trav6-3Q5R1E6 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-3Q5R1E6 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trav6-3Q5R1E6 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trav6-3Q5R1E6 Gm9867-201ENSMUST00000192212 2647 ntBASIC12.78□□□□□ -0.36
Trav6-3Q5R1E6 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-3Q5R1E6 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-3Q5R1E6 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-3Q5R1E6 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav6-3Q5R1E6 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-3Q5R1E6 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-3Q5R1E6 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-3Q5R1E6 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms