Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC12.44□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Gm32996-201ENSMUST00000199828 1447 ntBASIC12.44□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Gm13181-201ENSMUST00000120117 1069 ntBASIC12.43□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.43□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC12.43□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Gm42901-201ENSMUST00000197735 3171 ntBASIC12.42□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC12.42□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC12.42□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC12.42□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Slc35b2-202ENSMUST00000223987 1766 ntBASIC12.41□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC12.41□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC12.41□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms