Protein–RNA interactions for Protein: Q52KE7

Ccnl1, Cyclin-L1, mousemouse

Known RBP Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccnl1Q52KE7 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ccnl1Q52KE7 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccnl1Q52KE7 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ccnl1Q52KE7 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC20.07■□□□□ 0.8
Ccnl1Q52KE7 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccnl1Q52KE7 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Ccnl1Q52KE7 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC20.07■□□□□ 0.8
Ccnl1Q52KE7 AA543401-201ENSMUST00000164248 1269 ntBASIC20.07■□□□□ 0.8
Ccnl1Q52KE7 Gm44335-201ENSMUST00000196879 141 ntBASIC20.07■□□□□ 0.8
Ccnl1Q52KE7 Gm44297-201ENSMUST00000198304 141 ntBASIC20.07■□□□□ 0.8
Ccnl1Q52KE7 Gm44346-201ENSMUST00000198851 141 ntBASIC20.07■□□□□ 0.8
Ccnl1Q52KE7 Gm45612-201ENSMUST00000211320 160 ntBASIC20.07■□□□□ 0.8
Ccnl1Q52KE7 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC20.07■□□□□ 0.8
Ccnl1Q52KE7 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Ccnl1Q52KE7 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Ccnl1Q52KE7 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC20.07■□□□□ 0.8
Ccnl1Q52KE7 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Ccnl1Q52KE7 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccnl1Q52KE7 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccnl1Q52KE7 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccnl1Q52KE7 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Ccnl1Q52KE7 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccnl1Q52KE7 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccnl1Q52KE7 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccnl1Q52KE7 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Ccnl1Q52KE7 Gm43338-201ENSMUST00000198617 2223 ntBASIC20.06■□□□□ 0.8
Ccnl1Q52KE7 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccnl1Q52KE7 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ccnl1Q52KE7 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC20.06■□□□□ 0.8
Ccnl1Q52KE7 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC20.06■□□□□ 0.8
Ccnl1Q52KE7 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC20.06■□□□□ 0.8
Ccnl1Q52KE7 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccnl1Q52KE7 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ccnl1Q52KE7 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccnl1Q52KE7 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Ccnl1Q52KE7 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccnl1Q52KE7 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ccnl1Q52KE7 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccnl1Q52KE7 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccnl1Q52KE7 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ccnl1Q52KE7 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ccnl1Q52KE7 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Ccnl1Q52KE7 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Ccnl1Q52KE7 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ccnl1Q52KE7 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccnl1Q52KE7 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccnl1Q52KE7 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ccnl1Q52KE7 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccnl1Q52KE7 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC20.05■□□□□ 0.8
Ccnl1Q52KE7 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccnl1Q52KE7 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccnl1Q52KE7 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC20.05■□□□□ 0.8
Ccnl1Q52KE7 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ccnl1Q52KE7 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccnl1Q52KE7 Gm27301-201ENSMUST00000184012 127 ntBASIC20.05■□□□□ 0.8
Ccnl1Q52KE7 Gm5312-201ENSMUST00000203728 547 ntBASIC20.05■□□□□ 0.8
Ccnl1Q52KE7 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Ccnl1Q52KE7 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC20.05■□□□□ 0.8
Ccnl1Q52KE7 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccnl1Q52KE7 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccnl1Q52KE7 Nrn1-204ENSMUST00000224323 1779 ntBASIC20.05■□□□□ 0.8
Ccnl1Q52KE7 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Ccnl1Q52KE7 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC20.04■□□□□ 0.8
Ccnl1Q52KE7 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccnl1Q52KE7 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Ccnl1Q52KE7 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccnl1Q52KE7 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccnl1Q52KE7 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ccnl1Q52KE7 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccnl1Q52KE7 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccnl1Q52KE7 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ccnl1Q52KE7 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC20.04■□□□□ 0.8
Ccnl1Q52KE7 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC20.04■□□□□ 0.8
Ccnl1Q52KE7 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ccnl1Q52KE7 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC20.04■□□□□ 0.8
Ccnl1Q52KE7 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccnl1Q52KE7 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Ccnl1Q52KE7 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccnl1Q52KE7 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccnl1Q52KE7 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccnl1Q52KE7 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccnl1Q52KE7 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccnl1Q52KE7 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccnl1Q52KE7 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccnl1Q52KE7 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccnl1Q52KE7 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccnl1Q52KE7 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccnl1Q52KE7 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccnl1Q52KE7 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccnl1Q52KE7 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccnl1Q52KE7 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccnl1Q52KE7 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC20.03■□□□□ 0.8
Ccnl1Q52KE7 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ccnl1Q52KE7 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ccnl1Q52KE7 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ccnl1Q52KE7 Gm6226-201ENSMUST00000117765 1146 ntBASIC20.03■□□□□ 0.8
Ccnl1Q52KE7 Gm11745-201ENSMUST00000121669 448 ntBASIC20.03■□□□□ 0.8
Ccnl1Q52KE7 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC20.03■□□□□ 0.8
Ccnl1Q52KE7 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ccnl1Q52KE7 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms