Protein–RNA interactions for Protein: Q3V036

Ccdc27, Coiled-coil domain-containing protein 27, mousemouse

Predictions only

Length 639 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc27Q3V036 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc27Q3V036 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc27Q3V036 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC20.32■□□□□ 0.84
Ccdc27Q3V036 Mir5130-201ENSMUST00000175160 84 ntBASIC20.32■□□□□ 0.84
Ccdc27Q3V036 Gm3272-201ENSMUST00000181181 1229 ntBASIC20.32■□□□□ 0.84
Ccdc27Q3V036 Gm10566-201ENSMUST00000086739 996 ntBASIC20.32■□□□□ 0.84
Ccdc27Q3V036 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Ccdc27Q3V036 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc27Q3V036 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc27Q3V036 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc27Q3V036 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC20.32■□□□□ 0.84
Ccdc27Q3V036 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc27Q3V036 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc27Q3V036 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc27Q3V036 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc27Q3V036 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC20.31■□□□□ 0.84
Ccdc27Q3V036 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc27Q3V036 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc27Q3V036 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc27Q3V036 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC20.31■□□□□ 0.84
Ccdc27Q3V036 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Ccdc27Q3V036 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc27Q3V036 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc27Q3V036 Gm10710-201ENSMUST00000047876 3971 ntBASIC20.31■□□□□ 0.84
Ccdc27Q3V036 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC20.31■□□□□ 0.84
Ccdc27Q3V036 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC20.31■□□□□ 0.84
Ccdc27Q3V036 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc27Q3V036 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC20.31■□□□□ 0.84
Ccdc27Q3V036 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc27Q3V036 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Ccdc27Q3V036 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Ccdc27Q3V036 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC20.31■□□□□ 0.84
Ccdc27Q3V036 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc27Q3V036 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc27Q3V036 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc27Q3V036 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Ccdc27Q3V036 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc27Q3V036 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc27Q3V036 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc27Q3V036 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc27Q3V036 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc27Q3V036 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Ccdc27Q3V036 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc27Q3V036 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc27Q3V036 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc27Q3V036 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc27Q3V036 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
Ccdc27Q3V036 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc27Q3V036 Mir1668-201ENSMUST00000184114 107 ntBASIC20.3■□□□□ 0.84
Ccdc27Q3V036 Gm7889-201ENSMUST00000185591 958 ntBASIC20.3■□□□□ 0.84
Ccdc27Q3V036 Gm45058-201ENSMUST00000205810 766 ntBASIC20.3■□□□□ 0.84
Ccdc27Q3V036 Gm18959-201ENSMUST00000208954 655 ntBASIC20.3■□□□□ 0.84
Ccdc27Q3V036 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc27Q3V036 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc27Q3V036 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc27Q3V036 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc27Q3V036 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc27Q3V036 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc27Q3V036 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Ccdc27Q3V036 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc27Q3V036 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc27Q3V036 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc27Q3V036 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc27Q3V036 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc27Q3V036 Gm15565-201ENSMUST00000118890 427 ntBASIC20.29■□□□□ 0.84
Ccdc27Q3V036 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC20.29■□□□□ 0.84
Ccdc27Q3V036 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC20.29■□□□□ 0.84
Ccdc27Q3V036 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC20.29■□□□□ 0.84
Ccdc27Q3V036 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc27Q3V036 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC20.29■□□□□ 0.84
Ccdc27Q3V036 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc27Q3V036 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Ccdc27Q3V036 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc27Q3V036 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc27Q3V036 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc27Q3V036 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc27Q3V036 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc27Q3V036 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc27Q3V036 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc27Q3V036 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc27Q3V036 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Ccdc27Q3V036 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc27Q3V036 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc27Q3V036 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC20.28■□□□□ 0.84
Ccdc27Q3V036 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc27Q3V036 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc27Q3V036 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc27Q3V036 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc27Q3V036 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC20.28■□□□□ 0.84
Ccdc27Q3V036 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc27Q3V036 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
Ccdc27Q3V036 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc27Q3V036 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc27Q3V036 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc27Q3V036 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc27Q3V036 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc27Q3V036 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc27Q3V036 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
Ccdc27Q3V036 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Ccdc27Q3V036 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms