Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Mir3081-201ENSMUST00000175305 84 ntBASIC18.47■□□□□ 0.55
Cdkl5Q3UTQ8 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cdkl5Q3UTQ8 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC18.47■□□□□ 0.55
Cdkl5Q3UTQ8 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cdkl5Q3UTQ8 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cdkl5Q3UTQ8 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cdkl5Q3UTQ8 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Cdkl5Q3UTQ8 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cdkl5Q3UTQ8 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cdkl5Q3UTQ8 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cdkl5Q3UTQ8 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cdkl5Q3UTQ8 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cdkl5Q3UTQ8 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cdkl5Q3UTQ8 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cdkl5Q3UTQ8 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdkl5Q3UTQ8 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC18.46■□□□□ 0.55
Cdkl5Q3UTQ8 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdkl5Q3UTQ8 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC18.46■□□□□ 0.55
Cdkl5Q3UTQ8 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdkl5Q3UTQ8 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdkl5Q3UTQ8 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdkl5Q3UTQ8 Gm38327-201ENSMUST00000195852 1755 ntBASIC18.46■□□□□ 0.55
Cdkl5Q3UTQ8 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdkl5Q3UTQ8 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdkl5Q3UTQ8 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdkl5Q3UTQ8 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC18.46■□□□□ 0.55
Cdkl5Q3UTQ8 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdkl5Q3UTQ8 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdkl5Q3UTQ8 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdkl5Q3UTQ8 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdkl5Q3UTQ8 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdkl5Q3UTQ8 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdkl5Q3UTQ8 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdkl5Q3UTQ8 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdkl5Q3UTQ8 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdkl5Q3UTQ8 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Cdkl5Q3UTQ8 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdkl5Q3UTQ8 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdkl5Q3UTQ8 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdkl5Q3UTQ8 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Cdkl5Q3UTQ8 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdkl5Q3UTQ8 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdkl5Q3UTQ8 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC18.45■□□□□ 0.54
Cdkl5Q3UTQ8 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdkl5Q3UTQ8 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdkl5Q3UTQ8 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Cdkl5Q3UTQ8 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC18.45■□□□□ 0.54
Cdkl5Q3UTQ8 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Cdkl5Q3UTQ8 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdkl5Q3UTQ8 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Cdkl5Q3UTQ8 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
Cdkl5Q3UTQ8 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Cdkl5Q3UTQ8 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdkl5Q3UTQ8 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdkl5Q3UTQ8 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC18.44■□□□□ 0.54
Cdkl5Q3UTQ8 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdkl5Q3UTQ8 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Cdkl5Q3UTQ8 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cdkl5Q3UTQ8 Gm14859-201ENSMUST00000117752 357 ntBASIC18.44■□□□□ 0.54
Cdkl5Q3UTQ8 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC18.44■□□□□ 0.54
Cdkl5Q3UTQ8 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC18.44■□□□□ 0.54
Cdkl5Q3UTQ8 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdkl5Q3UTQ8 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cdkl5Q3UTQ8 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC18.44■□□□□ 0.54
Cdkl5Q3UTQ8 Gm7977-201ENSMUST00000193787 748 ntBASIC18.44■□□□□ 0.54
Cdkl5Q3UTQ8 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC18.44■□□□□ 0.54
Cdkl5Q3UTQ8 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdkl5Q3UTQ8 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
Cdkl5Q3UTQ8 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdkl5Q3UTQ8 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC18.44■□□□□ 0.54
Cdkl5Q3UTQ8 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdkl5Q3UTQ8 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Cdkl5Q3UTQ8 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cdkl5Q3UTQ8 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cdkl5Q3UTQ8 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cdkl5Q3UTQ8 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cdkl5Q3UTQ8 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cdkl5Q3UTQ8 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cdkl5Q3UTQ8 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cdkl5Q3UTQ8 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cdkl5Q3UTQ8 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cdkl5Q3UTQ8 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC18.43■□□□□ 0.54
Cdkl5Q3UTQ8 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cdkl5Q3UTQ8 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC18.43■□□□□ 0.54
Cdkl5Q3UTQ8 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cdkl5Q3UTQ8 Gm6257-201ENSMUST00000163864 910 ntBASIC18.43■□□□□ 0.54
Cdkl5Q3UTQ8 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Cdkl5Q3UTQ8 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cdkl5Q3UTQ8 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC18.43■□□□□ 0.54
Cdkl5Q3UTQ8 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cdkl5Q3UTQ8 Otx2os1-206ENSMUST00000228153 787 ntBASIC18.43■□□□□ 0.54
Cdkl5Q3UTQ8 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cdkl5Q3UTQ8 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cdkl5Q3UTQ8 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cdkl5Q3UTQ8 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cdkl5Q3UTQ8 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cdkl5Q3UTQ8 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cdkl5Q3UTQ8 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cdkl5Q3UTQ8 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Cdkl5Q3UTQ8 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms