Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cks1brtQ3UNC9 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cks1brtQ3UNC9 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cks1brtQ3UNC9 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cks1brtQ3UNC9 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cks1brtQ3UNC9 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Cks1brtQ3UNC9 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Cks1brtQ3UNC9 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cks1brtQ3UNC9 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cks1brtQ3UNC9 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cks1brtQ3UNC9 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC11.54□□□□□ -0.56
Cks1brtQ3UNC9 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cks1brtQ3UNC9 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Cks1brtQ3UNC9 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cks1brtQ3UNC9 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cks1brtQ3UNC9 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cks1brtQ3UNC9 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cks1brtQ3UNC9 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC11.54□□□□□ -0.56
Cks1brtQ3UNC9 AC093043.1-201ENSMUST00000226700 898 ntBASIC11.54□□□□□ -0.56
Cks1brtQ3UNC9 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cks1brtQ3UNC9 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cks1brtQ3UNC9 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cks1brtQ3UNC9 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC11.54□□□□□ -0.56
Cks1brtQ3UNC9 Gm42473-201ENSMUST00000201056 2291 ntBASIC11.54□□□□□ -0.56
Cks1brtQ3UNC9 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Cks1brtQ3UNC9 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cks1brtQ3UNC9 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Cks1brtQ3UNC9 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cks1brtQ3UNC9 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Cks1brtQ3UNC9 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cks1brtQ3UNC9 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cks1brtQ3UNC9 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cks1brtQ3UNC9 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cks1brtQ3UNC9 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cks1brtQ3UNC9 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Cks1brtQ3UNC9 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cks1brtQ3UNC9 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC11.53□□□□□ -0.56
Cks1brtQ3UNC9 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cks1brtQ3UNC9 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cks1brtQ3UNC9 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Cks1brtQ3UNC9 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cks1brtQ3UNC9 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cks1brtQ3UNC9 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Cks1brtQ3UNC9 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cks1brtQ3UNC9 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC11.53□□□□□ -0.56
Cks1brtQ3UNC9 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cks1brtQ3UNC9 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cks1brtQ3UNC9 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cks1brtQ3UNC9 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Cks1brtQ3UNC9 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cks1brtQ3UNC9 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cks1brtQ3UNC9 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cks1brtQ3UNC9 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cks1brtQ3UNC9 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC11.53□□□□□ -0.56
Cks1brtQ3UNC9 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cks1brtQ3UNC9 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Cks1brtQ3UNC9 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Cks1brtQ3UNC9 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cks1brtQ3UNC9 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Cks1brtQ3UNC9 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC11.53□□□□□ -0.56
Cks1brtQ3UNC9 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cks1brtQ3UNC9 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cks1brtQ3UNC9 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Cks1brtQ3UNC9 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cks1brtQ3UNC9 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Cks1brtQ3UNC9 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cks1brtQ3UNC9 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cks1brtQ3UNC9 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cks1brtQ3UNC9 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC11.53□□□□□ -0.56
Cks1brtQ3UNC9 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cks1brtQ3UNC9 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cks1brtQ3UNC9 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cks1brtQ3UNC9 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Cks1brtQ3UNC9 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cks1brtQ3UNC9 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Cks1brtQ3UNC9 AL590614.2-201ENSMUST00000225374 1937 ntBASIC11.52□□□□□ -0.56
Cks1brtQ3UNC9 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cks1brtQ3UNC9 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cks1brtQ3UNC9 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC11.52□□□□□ -0.56
Cks1brtQ3UNC9 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Cks1brtQ3UNC9 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Cks1brtQ3UNC9 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cks1brtQ3UNC9 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cks1brtQ3UNC9 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cks1brtQ3UNC9 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cks1brtQ3UNC9 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cks1brtQ3UNC9 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Cks1brtQ3UNC9 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cks1brtQ3UNC9 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cks1brtQ3UNC9 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cks1brtQ3UNC9 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cks1brtQ3UNC9 Gm14117-201ENSMUST00000122417 843 ntBASIC11.52□□□□□ -0.57
Cks1brtQ3UNC9 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cks1brtQ3UNC9 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cks1brtQ3UNC9 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cks1brtQ3UNC9 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cks1brtQ3UNC9 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Cks1brtQ3UNC9 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cks1brtQ3UNC9 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cks1brtQ3UNC9 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms