Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Cdx4Q07424 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC12.33□□□□□ -0.44
Cdx4Q07424 Gm11336-201ENSMUST00000118168 334 ntBASIC12.33□□□□□ -0.44
Cdx4Q07424 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cdx4Q07424 Mir3081-201ENSMUST00000175305 84 ntBASIC12.33□□□□□ -0.44
Cdx4Q07424 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdx4Q07424 Gm29707-201ENSMUST00000196325 491 ntBASIC12.33□□□□□ -0.44
Cdx4Q07424 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Cdx4Q07424 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdx4Q07424 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Cdx4Q07424 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Cdx4Q07424 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdx4Q07424 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cdx4Q07424 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdx4Q07424 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdx4Q07424 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdx4Q07424 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cdx4Q07424 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdx4Q07424 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC12.32□□□□□ -0.44
Cdx4Q07424 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdx4Q07424 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdx4Q07424 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdx4Q07424 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdx4Q07424 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdx4Q07424 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdx4Q07424 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cdx4Q07424 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdx4Q07424 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Cdx4Q07424 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Cdx4Q07424 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdx4Q07424 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Cdx4Q07424 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cdx4Q07424 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdx4Q07424 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdx4Q07424 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cdx4Q07424 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdx4Q07424 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC12.32□□□□□ -0.44
Cdx4Q07424 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Cdx4Q07424 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Cdx4Q07424 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Cdx4Q07424 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cdx4Q07424 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdx4Q07424 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdx4Q07424 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Cdx4Q07424 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Cdx4Q07424 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC12.31□□□□□ -0.44
Cdx4Q07424 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdx4Q07424 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdx4Q07424 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Cdx4Q07424 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdx4Q07424 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdx4Q07424 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdx4Q07424 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cdx4Q07424 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Cdx4Q07424 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC12.31□□□□□ -0.44
Cdx4Q07424 Gm27742-201ENSMUST00000184667 60 ntBASIC12.31□□□□□ -0.44
Cdx4Q07424 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC12.31□□□□□ -0.44
Cdx4Q07424 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdx4Q07424 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Cdx4Q07424 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdx4Q07424 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdx4Q07424 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdx4Q07424 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdx4Q07424 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdx4Q07424 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdx4Q07424 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdx4Q07424 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdx4Q07424 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC12.3□□□□□ -0.44
Cdx4Q07424 Zfp264-201ENSMUST00000208656 1563 ntBASIC12.3□□□□□ -0.44
Cdx4Q07424 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Cdx4Q07424 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Cdx4Q07424 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Cdx4Q07424 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdx4Q07424 Wnt10b-204ENSMUST00000226655 1807 ntBASIC12.3□□□□□ -0.44
Cdx4Q07424 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Cdx4Q07424 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cdx4Q07424 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC12.3□□□□□ -0.44
Cdx4Q07424 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdx4Q07424 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cdx4Q07424 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdx4Q07424 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Cdx4Q07424 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdx4Q07424 Phf7-203ENSMUST00000226565 1971 ntBASIC12.3□□□□□ -0.44
Cdx4Q07424 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cdx4Q07424 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdx4Q07424 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdx4Q07424 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdx4Q07424 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdx4Q07424 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdx4Q07424 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Cdx4Q07424 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Cdx4Q07424 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Cdx4Q07424 Gm43072-201ENSMUST00000200283 1671 ntBASIC12.29□□□□□ -0.44
Cdx4Q07424 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cdx4Q07424 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Cdx4Q07424 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdx4Q07424 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdx4Q07424 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdx4Q07424 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdx4Q07424 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms