Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Thbs3Q05895 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Thbs3Q05895 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Thbs3Q05895 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Thbs3Q05895 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Thbs3Q05895 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Thbs3Q05895 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Thbs3Q05895 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Thbs3Q05895 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Thbs3Q05895 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Thbs3Q05895 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Thbs3Q05895 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Thbs3Q05895 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Thbs3Q05895 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC13.98□□□□□ -0.17
Thbs3Q05895 Gm25406-201ENSMUST00000157599 105 ntBASIC13.98□□□□□ -0.17
Thbs3Q05895 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC13.98□□□□□ -0.17
Thbs3Q05895 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Thbs3Q05895 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
Thbs3Q05895 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
Thbs3Q05895 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
Thbs3Q05895 AC153889.1-201ENSMUST00000219257 330 ntBASIC13.98□□□□□ -0.17
Thbs3Q05895 AC127349.1-201ENSMUST00000224590 266 ntBASIC13.98□□□□□ -0.17
Thbs3Q05895 AC124569.2-201ENSMUST00000225998 818 ntBASIC13.98□□□□□ -0.17
Thbs3Q05895 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Thbs3Q05895 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC13.98□□□□□ -0.17
Thbs3Q05895 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Thbs3Q05895 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Thbs3Q05895 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Thbs3Q05895 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Thbs3Q05895 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Thbs3Q05895 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Thbs3Q05895 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Thbs3Q05895 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Thbs3Q05895 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Thbs3Q05895 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Thbs3Q05895 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC13.97□□□□□ -0.17
Thbs3Q05895 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Thbs3Q05895 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Thbs3Q05895 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Thbs3Q05895 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Thbs3Q05895 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Thbs3Q05895 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC13.97□□□□□ -0.17
Thbs3Q05895 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Thbs3Q05895 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Thbs3Q05895 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Thbs3Q05895 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Thbs3Q05895 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Thbs3Q05895 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Thbs3Q05895 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Thbs3Q05895 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC13.97□□□□□ -0.17
Thbs3Q05895 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Thbs3Q05895 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Thbs3Q05895 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Thbs3Q05895 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
Thbs3Q05895 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Thbs3Q05895 Gm15165-201ENSMUST00000118140 502 ntBASIC13.97□□□□□ -0.17
Thbs3Q05895 Gm15372-201ENSMUST00000120729 834 ntBASIC13.97□□□□□ -0.17
Thbs3Q05895 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Thbs3Q05895 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Thbs3Q05895 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC13.97□□□□□ -0.17
Thbs3Q05895 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC13.97□□□□□ -0.17
Thbs3Q05895 AC108846.1-201ENSMUST00000214531 513 ntBASIC13.97□□□□□ -0.17
Thbs3Q05895 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Thbs3Q05895 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Thbs3Q05895 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Thbs3Q05895 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Thbs3Q05895 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC13.97□□□□□ -0.17
Thbs3Q05895 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Thbs3Q05895 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Thbs3Q05895 Gm19430-201ENSMUST00000193847 2137 ntBASIC13.97□□□□□ -0.17
Thbs3Q05895 AC069562.2-201ENSMUST00000224644 2146 ntBASIC13.97□□□□□ -0.17
Thbs3Q05895 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Thbs3Q05895 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Thbs3Q05895 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Thbs3Q05895 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Thbs3Q05895 Gm44729-201ENSMUST00000206759 2052 ntBASIC13.97□□□□□ -0.17
Thbs3Q05895 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Thbs3Q05895 Ntrk2-205ENSMUST00000224402 2284 ntBASIC13.97□□□□□ -0.17
Thbs3Q05895 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Thbs3Q05895 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Thbs3Q05895 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Thbs3Q05895 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
Thbs3Q05895 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Thbs3Q05895 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Thbs3Q05895 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Thbs3Q05895 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Thbs3Q05895 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Thbs3Q05895 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Thbs3Q05895 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Thbs3Q05895 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Thbs3Q05895 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Thbs3Q05895 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Thbs3Q05895 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Thbs3Q05895 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Thbs3Q05895 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Thbs3Q05895 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Thbs3Q05895 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Thbs3Q05895 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Thbs3Q05895 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC13.96□□□□□ -0.17
Thbs3Q05895 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms