Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SgcbP82349 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SgcbP82349 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SgcbP82349 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SgcbP82349 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SgcbP82349 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SgcbP82349 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SgcbP82349 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SgcbP82349 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SgcbP82349 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SgcbP82349 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.2□□□□□ -0.14
SgcbP82349 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SgcbP82349 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SgcbP82349 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
SgcbP82349 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SgcbP82349 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SgcbP82349 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
SgcbP82349 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SgcbP82349 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SgcbP82349 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SgcbP82349 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SgcbP82349 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SgcbP82349 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SgcbP82349 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
SgcbP82349 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
SgcbP82349 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SgcbP82349 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SgcbP82349 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SgcbP82349 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SgcbP82349 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SgcbP82349 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.19□□□□□ -0.14
SgcbP82349 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.19□□□□□ -0.14
SgcbP82349 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SgcbP82349 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC14.19□□□□□ -0.14
SgcbP82349 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.19□□□□□ -0.14
SgcbP82349 Gm25745-201ENSMUST00000174945 133 ntBASIC14.19□□□□□ -0.14
SgcbP82349 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.19□□□□□ -0.14
SgcbP82349 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
SgcbP82349 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.19□□□□□ -0.14
SgcbP82349 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.19□□□□□ -0.14
SgcbP82349 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SgcbP82349 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SgcbP82349 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SgcbP82349 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SgcbP82349 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SgcbP82349 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SgcbP82349 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
SgcbP82349 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SgcbP82349 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SgcbP82349 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.18□□□□□ -0.14
SgcbP82349 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SgcbP82349 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SgcbP82349 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SgcbP82349 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SgcbP82349 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
SgcbP82349 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SgcbP82349 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SgcbP82349 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SgcbP82349 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
SgcbP82349 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
SgcbP82349 Gm27741-201ENSMUST00000185060 237 ntBASIC14.18□□□□□ -0.14
SgcbP82349 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SgcbP82349 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SgcbP82349 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SgcbP82349 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.18□□□□□ -0.14
SgcbP82349 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SgcbP82349 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
SgcbP82349 Haglr-201ENSMUST00000100000 2085 ntBASIC14.18□□□□□ -0.14
SgcbP82349 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SgcbP82349 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SgcbP82349 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
SgcbP82349 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SgcbP82349 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SgcbP82349 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SgcbP82349 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SgcbP82349 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
SgcbP82349 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SgcbP82349 Birc2-201ENSMUST00000054878 378 ntBASIC14.17□□□□□ -0.14
SgcbP82349 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
SgcbP82349 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SgcbP82349 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.17□□□□□ -0.14
SgcbP82349 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SgcbP82349 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SgcbP82349 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SgcbP82349 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SgcbP82349 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SgcbP82349 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
SgcbP82349 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SgcbP82349 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SgcbP82349 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SgcbP82349 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SgcbP82349 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SgcbP82349 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SgcbP82349 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SgcbP82349 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SgcbP82349 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SgcbP82349 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.16□□□□□ -0.14
SgcbP82349 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.16□□□□□ -0.14
SgcbP82349 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SgcbP82349 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms