Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CiitaP79621 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CiitaP79621 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CiitaP79621 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CiitaP79621 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.24■□□□□ 0.35
CiitaP79621 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CiitaP79621 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.24■□□□□ 0.35
CiitaP79621 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CiitaP79621 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CiitaP79621 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.24■□□□□ 0.35
CiitaP79621 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CiitaP79621 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC17.24■□□□□ 0.35
CiitaP79621 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CiitaP79621 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CiitaP79621 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CiitaP79621 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CiitaP79621 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CiitaP79621 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CiitaP79621 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CiitaP79621 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CiitaP79621 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CiitaP79621 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CiitaP79621 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CiitaP79621 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CiitaP79621 Gm15173-201ENSMUST00000122049 433 ntBASIC17.23■□□□□ 0.35
CiitaP79621 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CiitaP79621 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CiitaP79621 Gm43514-201ENSMUST00000198852 424 ntBASIC17.23■□□□□ 0.35
CiitaP79621 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC17.23■□□□□ 0.35
CiitaP79621 AV026068-213ENSMUST00000223675 1171 ntBASIC17.23■□□□□ 0.35
CiitaP79621 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
CiitaP79621 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CiitaP79621 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CiitaP79621 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CiitaP79621 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CiitaP79621 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CiitaP79621 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CiitaP79621 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CiitaP79621 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CiitaP79621 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.23■□□□□ 0.35
CiitaP79621 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CiitaP79621 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CiitaP79621 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CiitaP79621 Gm37500-201ENSMUST00000192059 1443 ntBASIC17.22■□□□□ 0.35
CiitaP79621 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CiitaP79621 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CiitaP79621 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC17.22■□□□□ 0.35
CiitaP79621 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CiitaP79621 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CiitaP79621 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CiitaP79621 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
CiitaP79621 Gm1401-201ENSMUST00000122048 772 ntBASIC17.22■□□□□ 0.35
CiitaP79621 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CiitaP79621 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC17.22■□□□□ 0.35
CiitaP79621 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC17.22■□□□□ 0.35
CiitaP79621 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
CiitaP79621 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CiitaP79621 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC17.22■□□□□ 0.35
CiitaP79621 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CiitaP79621 Wnt10b-206ENSMUST00000228546 2709 ntBASIC17.22■□□□□ 0.35
CiitaP79621 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC17.22■□□□□ 0.35
CiitaP79621 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CiitaP79621 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CiitaP79621 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CiitaP79621 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CiitaP79621 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CiitaP79621 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC17.21■□□□□ 0.35
CiitaP79621 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CiitaP79621 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CiitaP79621 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CiitaP79621 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CiitaP79621 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CiitaP79621 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CiitaP79621 AC154527.4-201ENSMUST00000224364 1667 ntBASIC17.21■□□□□ 0.35
CiitaP79621 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CiitaP79621 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CiitaP79621 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC17.21■□□□□ 0.35
CiitaP79621 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CiitaP79621 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CiitaP79621 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CiitaP79621 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CiitaP79621 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CiitaP79621 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CiitaP79621 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CiitaP79621 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CiitaP79621 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC17.21■□□□□ 0.34
CiitaP79621 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CiitaP79621 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CiitaP79621 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CiitaP79621 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
CiitaP79621 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CiitaP79621 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CiitaP79621 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CiitaP79621 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CiitaP79621 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.2■□□□□ 0.34
CiitaP79621 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CiitaP79621 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CiitaP79621 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC17.2■□□□□ 0.34
CiitaP79621 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC17.2■□□□□ 0.34
CiitaP79621 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms