Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Lsm3P62311 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Lsm3P62311 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lsm3P62311 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lsm3P62311 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Lsm3P62311 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lsm3P62311 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lsm3P62311 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lsm3P62311 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Lsm3P62311 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lsm3P62311 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lsm3P62311 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lsm3P62311 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lsm3P62311 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.61□□□□□ -0.07
Lsm3P62311 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.61□□□□□ -0.07
Lsm3P62311 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lsm3P62311 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lsm3P62311 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lsm3P62311 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Lsm3P62311 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Lsm3P62311 Gm6211-202ENSMUST00000167849 925 ntBASIC14.61□□□□□ -0.07
Lsm3P62311 AC099934.2-201ENSMUST00000196389 70 ntBASIC14.61□□□□□ -0.07
Lsm3P62311 AC156953.1-201ENSMUST00000196953 70 ntBASIC14.61□□□□□ -0.07
Lsm3P62311 AC157822.2-201ENSMUST00000200291 70 ntBASIC14.61□□□□□ -0.07
Lsm3P62311 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC14.61□□□□□ -0.07
Lsm3P62311 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC14.61□□□□□ -0.07
Lsm3P62311 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lsm3P62311 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lsm3P62311 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lsm3P62311 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lsm3P62311 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.61□□□□□ -0.07
Lsm3P62311 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Lsm3P62311 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Lsm3P62311 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.61□□□□□ -0.07
Lsm3P62311 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Lsm3P62311 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.61□□□□□ -0.07
Lsm3P62311 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lsm3P62311 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lsm3P62311 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lsm3P62311 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.6□□□□□ -0.07
Lsm3P62311 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lsm3P62311 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lsm3P62311 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
Lsm3P62311 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lsm3P62311 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Lsm3P62311 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lsm3P62311 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lsm3P62311 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC14.6□□□□□ -0.07
Lsm3P62311 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Lsm3P62311 Gm4974-201ENSMUST00000209974 875 ntBASIC14.6□□□□□ -0.07
Lsm3P62311 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC14.6□□□□□ -0.07
Lsm3P62311 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lsm3P62311 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Lsm3P62311 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lsm3P62311 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Lsm3P62311 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lsm3P62311 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lsm3P62311 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Lsm3P62311 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lsm3P62311 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.6□□□□□ -0.07
Lsm3P62311 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
Lsm3P62311 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Lsm3P62311 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
Lsm3P62311 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Lsm3P62311 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lsm3P62311 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lsm3P62311 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lsm3P62311 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lsm3P62311 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Lsm3P62311 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lsm3P62311 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Lsm3P62311 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
Lsm3P62311 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC14.59□□□□□ -0.07
Lsm3P62311 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC14.59□□□□□ -0.07
Lsm3P62311 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC14.59□□□□□ -0.07
Lsm3P62311 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Lsm3P62311 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lsm3P62311 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Lsm3P62311 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
Lsm3P62311 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lsm3P62311 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lsm3P62311 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Lsm3P62311 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Lsm3P62311 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lsm3P62311 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lsm3P62311 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lsm3P62311 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lsm3P62311 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Lsm3P62311 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Lsm3P62311 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lsm3P62311 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lsm3P62311 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lsm3P62311 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lsm3P62311 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Lsm3P62311 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lsm3P62311 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lsm3P62311 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lsm3P62311 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.59□□□□□ -0.07
Lsm3P62311 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.58□□□□□ -0.07
Lsm3P62311 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms