Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nub1P54729 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Nub1P54729 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nub1P54729 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nub1P54729 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC17.15■□□□□ 0.34
Nub1P54729 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nub1P54729 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nub1P54729 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nub1P54729 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nub1P54729 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.14■□□□□ 0.34
Nub1P54729 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Nub1P54729 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nub1P54729 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Nub1P54729 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nub1P54729 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nub1P54729 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nub1P54729 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nub1P54729 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nub1P54729 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nub1P54729 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nub1P54729 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nub1P54729 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.14■□□□□ 0.33
Nub1P54729 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Nub1P54729 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.14■□□□□ 0.33
Nub1P54729 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Nub1P54729 Gm7507-201ENSMUST00000183053 1008 ntBASIC17.14■□□□□ 0.33
Nub1P54729 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nub1P54729 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Nub1P54729 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nub1P54729 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nub1P54729 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nub1P54729 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.14■□□□□ 0.33
Nub1P54729 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nub1P54729 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nub1P54729 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Nub1P54729 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nub1P54729 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Nub1P54729 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC17.14■□□□□ 0.33
Nub1P54729 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Nub1P54729 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Nub1P54729 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nub1P54729 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.14■□□□□ 0.33
Nub1P54729 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Nub1P54729 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nub1P54729 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nub1P54729 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nub1P54729 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Nub1P54729 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nub1P54729 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nub1P54729 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nub1P54729 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nub1P54729 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nub1P54729 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nub1P54729 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC17.13■□□□□ 0.33
Nub1P54729 Gm18669-201ENSMUST00000216049 778 ntBASIC17.13■□□□□ 0.33
Nub1P54729 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nub1P54729 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Nub1P54729 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Nub1P54729 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nub1P54729 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nub1P54729 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nub1P54729 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nub1P54729 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nub1P54729 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nub1P54729 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Nub1P54729 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nub1P54729 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.12■□□□□ 0.33
Nub1P54729 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nub1P54729 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nub1P54729 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nub1P54729 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.12■□□□□ 0.33
Nub1P54729 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nub1P54729 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Nub1P54729 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.12■□□□□ 0.33
Nub1P54729 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nub1P54729 Rprl3-201ENSMUST00000157400 290 ntBASIC17.12■□□□□ 0.33
Nub1P54729 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.12■□□□□ 0.33
Nub1P54729 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.12■□□□□ 0.33
Nub1P54729 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nub1P54729 Gm43072-201ENSMUST00000200283 1671 ntBASIC17.12■□□□□ 0.33
Nub1P54729 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nub1P54729 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nub1P54729 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nub1P54729 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nub1P54729 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nub1P54729 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC17.12■□□□□ 0.33
Nub1P54729 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nub1P54729 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nub1P54729 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nub1P54729 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nub1P54729 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nub1P54729 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nub1P54729 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nub1P54729 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Nub1P54729 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nub1P54729 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nub1P54729 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nub1P54729 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nub1P54729 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nub1P54729 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms