Protein–RNA interactions for Protein: P50586

Tub, Tubby protein, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TubP50586 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TubP50586 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.32■□□□□ 0.2
TubP50586 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
TubP50586 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TubP50586 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TubP50586 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TubP50586 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TubP50586 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TubP50586 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TubP50586 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.32■□□□□ 0.2
TubP50586 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TubP50586 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TubP50586 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.32■□□□□ 0.2
TubP50586 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC16.32■□□□□ 0.2
TubP50586 Umpk-ps-201ENSMUST00000211897 827 ntBASIC16.32■□□□□ 0.2
TubP50586 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.32■□□□□ 0.2
TubP50586 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TubP50586 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TubP50586 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TubP50586 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TubP50586 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TubP50586 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TubP50586 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TubP50586 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TubP50586 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
TubP50586 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.32■□□□□ 0.2
TubP50586 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TubP50586 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TubP50586 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TubP50586 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
TubP50586 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TubP50586 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TubP50586 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TubP50586 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TubP50586 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TubP50586 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TubP50586 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TubP50586 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TubP50586 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TubP50586 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TubP50586 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TubP50586 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TubP50586 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
TubP50586 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TubP50586 Gm24589-201ENSMUST00000116692 94 ntBASIC16.31■□□□□ 0.2
TubP50586 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.31■□□□□ 0.2
TubP50586 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.31■□□□□ 0.2
TubP50586 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TubP50586 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TubP50586 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TubP50586 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TubP50586 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TubP50586 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.31■□□□□ 0.2
TubP50586 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.31■□□□□ 0.2
TubP50586 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
TubP50586 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.3■□□□□ 0.2
TubP50586 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TubP50586 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.3■□□□□ 0.2
TubP50586 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TubP50586 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TubP50586 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TubP50586 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TubP50586 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TubP50586 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TubP50586 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
TubP50586 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TubP50586 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TubP50586 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TubP50586 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TubP50586 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
TubP50586 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.3■□□□□ 0.2
TubP50586 Gm7506-201ENSMUST00000207758 815 ntBASIC16.3■□□□□ 0.2
TubP50586 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.3■□□□□ 0.2
TubP50586 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.3■□□□□ 0.2
TubP50586 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.3■□□□□ 0.2
TubP50586 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TubP50586 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
TubP50586 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TubP50586 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TubP50586 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TubP50586 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TubP50586 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TubP50586 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.3■□□□□ 0.2
TubP50586 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TubP50586 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TubP50586 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TubP50586 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TubP50586 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TubP50586 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TubP50586 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TubP50586 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TubP50586 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TubP50586 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TubP50586 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.29■□□□□ 0.2
TubP50586 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.29■□□□□ 0.2
TubP50586 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
TubP50586 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TubP50586 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TubP50586 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.29■□□□□ 0.2
TubP50586 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms