Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC18.9■□□□□ 0.62
Ercc3P49135 AC160338.1-201ENSMUST00000214232 705 ntBASIC18.9■□□□□ 0.62
Ercc3P49135 AC108846.1-201ENSMUST00000214531 513 ntBASIC18.9■□□□□ 0.62
Ercc3P49135 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
Ercc3P49135 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
Ercc3P49135 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.62
Ercc3P49135 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Ercc3P49135 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Ercc3P49135 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Ercc3P49135 CT010478.1-201ENSMUST00000220747 2787 ntBASIC18.89■□□□□ 0.62
Ercc3P49135 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC18.89■□□□□ 0.61
Ercc3P49135 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ercc3P49135 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ercc3P49135 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ercc3P49135 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC18.89■□□□□ 0.61
Ercc3P49135 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ercc3P49135 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC18.89■□□□□ 0.61
Ercc3P49135 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC18.89■□□□□ 0.61
Ercc3P49135 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ercc3P49135 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ercc3P49135 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
Ercc3P49135 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ercc3P49135 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ercc3P49135 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ercc3P49135 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ercc3P49135 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ercc3P49135 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ercc3P49135 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ercc3P49135 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ercc3P49135 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ercc3P49135 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ercc3P49135 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ercc3P49135 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ercc3P49135 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC18.88■□□□□ 0.61
Ercc3P49135 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
Ercc3P49135 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ercc3P49135 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ercc3P49135 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Ercc3P49135 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Ercc3P49135 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ercc3P49135 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ercc3P49135 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ercc3P49135 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Ercc3P49135 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC18.88■□□□□ 0.61
Ercc3P49135 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC18.87■□□□□ 0.61
Ercc3P49135 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC18.87■□□□□ 0.61
Ercc3P49135 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ercc3P49135 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC18.87■□□□□ 0.61
Ercc3P49135 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ercc3P49135 Gm1818-201ENSMUST00000169406 1184 ntBASIC18.87■□□□□ 0.61
Ercc3P49135 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ercc3P49135 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ercc3P49135 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ercc3P49135 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ercc3P49135 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ercc3P49135 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ercc3P49135 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ercc3P49135 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ercc3P49135 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ercc3P49135 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Ercc3P49135 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ercc3P49135 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ercc3P49135 Grk6-207ENSMUST00000225925 2769 ntBASIC18.87■□□□□ 0.61
Ercc3P49135 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ercc3P49135 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ercc3P49135 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ercc3P49135 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC18.86■□□□□ 0.61
Ercc3P49135 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Ercc3P49135 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ercc3P49135 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC18.86■□□□□ 0.61
Ercc3P49135 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ercc3P49135 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC18.86■□□□□ 0.61
Ercc3P49135 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ercc3P49135 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ercc3P49135 AC127349.1-201ENSMUST00000224590 266 ntBASIC18.86■□□□□ 0.61
Ercc3P49135 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Ercc3P49135 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Ercc3P49135 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ercc3P49135 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ercc3P49135 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ercc3P49135 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ercc3P49135 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ercc3P49135 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC18.86■□□□□ 0.61
Ercc3P49135 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ercc3P49135 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC18.85■□□□□ 0.61
Ercc3P49135 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Ercc3P49135 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ercc3P49135 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ercc3P49135 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ercc3P49135 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ercc3P49135 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ercc3P49135 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ercc3P49135 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC18.85■□□□□ 0.61
Ercc3P49135 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC18.85■□□□□ 0.61
Ercc3P49135 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ercc3P49135 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ercc3P49135 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ercc3P49135 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Ercc3P49135 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ercc3P49135 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms